Coffea arabica (coffee): 113697099
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Entry
113697099 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113697099
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113697099
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113697099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-ANAPC11
zf-RING_UBOX
zf-rbx1
RIMB1_N
zf-C3HC4
Beta-prop_SPT8
RNase_Y_N
zf-C3HC4_2
zf-C3HC4_4
zf-RING_11
WDR55
Pep3_Vps18
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
113697099
NCBI-ProteinID:
XP_027072362
UniProt:
A0A6P6T2Y5
LinkDB
All DBs
Position
6e:complement(3327477..3335186)
Genome browser
AA seq
677 aa
AA seq
DB search
MLTINFLIVKQIQVGFFCVRSIEHGKRGNFFPPTPELHNCKQNPGISMPDDADPYYAMYI
PLIQDPYPMEIDYYDEEQEDEDDDAAAAGTQNVMFPGPAAGRVLEGSGATTTTASSQDGL
SYREYQGFRDAPEARDQPSPKKSKRGEATPLKDAKWENPGEGDWHRDELDGLFCPICLEA
WTSGDDHQVCCIPCGHIYGMSCIKRWLKQCGSQGKCPQCNMKCTLEDIRVLYASRIVVVD
GELQKKVQSLESKCTSLGKKNLILSKKEKGWQKREADLSMQIQNLREKATYLEGLLENMS
IVQSGLPYTSQDCKGQPFSEFGHQECPNGFLLQTDLHIEGARFFDVDVHSQTTMVARRLS
GMAGPYELTKISLLAPHARENIQLPLSTRVIKDLRISPHAKLALLASLGKKLYVLSTESN
NTIVTYDLPAAAWSCTWDLNNSNYVYAGLQNGMVLEFDLRQTLRPVESMIGLTSNPIHTV
LSLSADFAVNSGIRSVLTASSVGLCHWNFGCSEEKSFLIPESMNEGVCISLAYGPKCGDI
VASFRPRVETAGVNLSPSLSTPSASLLGQGVQGSHVLYKRVGSAQRYHKLRSTSASVNDI
RLPKSAIVDRVNLKSLYAAGDEVTGDLVLQQLPCLVDVQRLKSRKCVRDVKYSQILNSEL
LSCLSEDTLQLFSSKMS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccattaattttttaatagtgaaacaaatacaggttgggtttttctgcgttcgc
tccatagaacacggaaaaagaggcaattttttccctccaactcctgaacttcacaactgc
aaacaaaatccgggaatctctatgccggatgatgcagacccgtattacgcaatgtacatt
ccattgattcaggatccataccctatggaaatcgattactatgacgaagaacaagaggac
gaggacgacgacgctgctgctgctgggacgcagaatgttatgtttccgggaccagcggca
ggtagggttttggagggcagtggtgctactactacgacggcttcgtctcaggatggttta
agttaccgtgagtatcagggttttagggatgcacctgaagcaagggaccagcctagtcct
aaaaagtctaaaaggggtgaagcgacaccgctgaaggatgctaaatgggaaaatcctggt
gaaggagactggcatagggatgagcttgacgggttattttgcccaatctgcctggaggcc
tggaccagtggcgatgatcatcaagtctgctgtattccatgtggtcatatatatgggatg
tcttgcatcaaaagatggctgaagcaatgtggaagtcaagggaagtgccctcaatgcaac
atgaagtgcacactagaagatatcagagtgctttatgcctctcgaattgttgttgttgat
ggagagttgcaaaagaaagttcaatctcttgaatctaaatgcacttccttggggaagaag
aatctgatcttgtctaagaaagaaaaggggtggcagaagagagaagctgatttgagcatg
cagatacagaaccttagagagaaagctacttatttggagggattgttggaaaacatgtca
atagtgcaatcaggattgccctataccagtcaggattgcaaaggacaacccttttctgag
tttggccaccaagaatgtccaaatggttttctgttgcagacggacttacacattgagggt
gctcgattctttgatgtggatgttcatagtcaaactacgatggttgctcgaaggctttct
ggcatggcaggaccatatgagcttaccaaaataagcttattggctccacatgcaagagaa
aacattcagcttcctctaagcaccagagttatcaaggatttacgtatttcccctcatgct
aaacttgcactattggcttccttgggaaagaaattatacgttcttagcacggaaagcaac
aataccattgtcacatatgacttaccggctgctgcttggtcgtgtacatgggatctcaat
aattcgaattatgtatatgctgggttacagaatggcatggtattggaatttgacctgcgt
caaactttgagacctgtggaatcaatgattggcttgacaagcaacccaattcatactgtg
ctctctctttcagctgacttcgctgtcaattctggtattagatcagttctaactgcctcc
tccgttggtttgtgccattggaactttggttgcagcgaagaaaagtcttttttgattcca
gaatcaatgaatgaaggtgtttgtatatctcttgcttatggtcctaaatgtggggatatt
gttgcttcttttcgtcctagagttgagacagcaggagtaaacctttcgccttcgttgtcc
actccatccgcctctctcttggggcaaggagtacagggttctcatgtcctttacaagaga
gttggtagcgctcaaagatatcataaattaaggtctacttctgcaagtgtaaatgacatt
cggctaccgaaatctgctatagttgacagagtgaatctgaaatcgttgtatgctgctggg
gatgaagtaacaggtgacttggtcttgcaacagttgccttgtttagtggatgttcagcgt
ctaaagtctcggaaatgtgttcgtgatgtgaaatactcgcagatcctaaactcggagttg
cttagttgcttgagtgaggacacattgcaacttttttcgtctaagatgtcatga
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