Coffea arabica (coffee): 113697325
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Entry
113697325 CDS
T11342
Name
(RefSeq) F-box/LRR-repeat protein 3-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113697325
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113697325
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box_5
LRR_At1g61320_AtMIF1
LRR_NXF1-5
LRR_16
F-box
Motif
Other DBs
NCBI-GeneID:
113697325
NCBI-ProteinID:
XP_071910285
UniProt:
A0ABM4USM9
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Position
6e:606341..611744
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AA seq
666 aa
AA seq
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MKRQKSTSESNFNHFDLLSEEMVFLVLDWLNDNPLDRKSFSLVCKSFYAIESRHRKTLKP
LRPEHLTKILNRYPCVTNLDLSLCPRITDSSLAVISTASKEMLRSIDLSRSKFYSHVGLS
NLVMNCGNLVEINLSNATELKDRAASAIAEAKNLEKLWLVRCRSITDIGIGCVAVGCRKL
RLLCLKWCLGVGDLGVDLIAVKCKEIRSMDLSYLPITNKCLPSILKLQYLEHLALEGCLG
FDDDSLAALKQGFKSLETLDMSSCENVSHVGLSSLTSGSGCLRQLILAYGSPVTLALADS
LQKLSMLQSIKLDGCQVTCSGLKAIGNWRVSLRELSLSKCPGVTDEGLSSLLKKHRDLRK
LDITCCHKITDITIAHITNSCSSLTSLRMESCSLVSAEAFVLIGQRCHFLEELDLTDNEI
NDEGLRSISRCSRLSILKLGICLNITDEGLIHIGICCSKLKELDLYRSAGISDSGILAIA
RGCAGLEMINIAYCKDITDYSLISLSKCSKLNTLESRGCTLITSLGLAAIAVGCKQLNKL
DIKKCHNIDDAGMIPLAHFSQNLRQINLSYTSVTDVGLLSLASISCLQSMTILHLKGLTP
SGLAAALLVCGGLTKVKLLGSFKSKLPQPLFDLLGARGCVFQWRDKAFQAELDSRCWKFQ
LNTAEQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacaaaaatcgacttctgaatccaatttcaaccactttgatcttctgtccgaa
gagatggtctttttagttcttgattggctgaatgataaccctcttgacaggaaatcgttt
tcccttgtttgcaaatccttttacgctattgagtcaagacacaggaaaaccctgaagccc
cttaggcctgagcacttaaccaagattctcaatcgatacccttgtgtcaccaatcttgat
ctgtctctctgtcccagaataacagacagctcgctggctgtaatatcgactgcctccaag
gaaatgctgaggtcaatcgatctttcgaggtccaagttttacagtcatgtggggttgtcc
aatctggtgatgaattgtgggaatttggttgagatcaatttgtctaacgccacagaacta
aaggacagggctgcatcagcgatagctgaggccaagaatctggagaagctttggttggtg
aggtgcaggtcaataactgatattggaataggatgtgttgcagtggggtgtagaaagctg
aggttgctttgcttaaagtggtgtttgggtgttggtgatttaggggttgatttgattgcc
gtcaagtgtaaggagattcgtagcatggatctctcctacttgcctataacaaataagtgc
ttgccatcaatcttaaagctgcaatatcttgaacatttggctttagaaggctgcttgggg
tttgacgatgacagccttgcagcactcaagcaagggttcaagtcgctcgagacacttgac
atgtcaagctgtgagaatgttagtcatgtgggcttgtcatctctaaccagtggctctggg
tgtttgcggcaacttatcttggcttatgggtctcctgtcactcttgctcttgctgatagt
ttgcaaaagctctcaatgctgcaatccattaaactagatggttgccaggttacgtgctct
ggactaaaggctattggaaactggcgcgtctctttgagggaactgagcttgagtaaatgc
ccaggagtgacagatgaaggcctttcctctcttctcaagaaacatagggacttgagaaag
cttgacatcacttgttgccacaagataactgatattaccattgcccacattacaaattcg
tgctcctcactgacatccctgaggatggaatcctgcagtttggtttcagctgaagctttt
gttttgattggacagcgatgccattttcttgaggagcttgaccttacagataatgaaatc
aatgatgaaggccttaggtccatctcaaggtgttccagactttccatcttaaagttgggg
atctgtttgaacattacagatgaggggcttatacatattggcatatgctgttcgaaactt
aaggagcttgacttgtataggtctgctggaatttctgattcaggcattttggcaattgct
cgtggctgtgctgggcttgaaatgataaatatagcctattgcaaagatattacagattac
tccttgatatcattgtcaaaatgttcaaagttaaacacgcttgaaagtcgaggatgtact
cttatcacatcgttgggtttagcagccattgctgtgggatgcaagcagctcaacaagctt
gacattaagaagtgccacaatattgatgatgctggaatgattccacttgctcacttttct
caaaaccttagacagataaatttgtcatacacctcagtcacagatgtagggcttttatcc
ctcgctagtatcagttgtctacagagcatgaccatactgcacctcaagggcttgacccct
agtgggctggcagctgcattgttggtttgtggaggactaaccaaagtgaaactcctgggg
tccttcaaatctaagttaccgcaacctctgtttgatcttttaggagcccgtgggtgcgtt
tttcaatggagagataaagcgtttcaggctgagttagactcgagatgttggaaatttcag
ttaaatactgcggaacaatga
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