Coffea arabica (coffee): 113697518
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Entry
113697518 CDS
T11342
Name
(RefSeq) transcription repressor MYB5-like
KO
K09422
transcription factor MYB, plant
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113697518
Transcription factors [BR:
carb03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
113697518
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF1456
Motif
Other DBs
NCBI-GeneID:
113697518
NCBI-ProteinID:
XP_027072986
UniProt:
A0A6P6T503
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Position
7c:243265..245014
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AA seq
340 aa
AA seq
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MRNPSSKPQAAAAANSTGAGASSNKTKVGLKRGPWTPEEDELLSDYIKREGEGRWRTLPK
KAGLLRCGKSCRLRWMNYLRPSVKRGHIAWDEEDLILRLHRLLGNRWSLIAGRIPGRTDN
EIKNYWNTHLSKKLISQGIDPRTHKPLEPNYSDSNNENKASSSKLHHAVADHPSSSSYEP
SAAVVIKDSRDASTSNIPIDGIEFNSDDQYQNPETTAGEVHVNMQNADHEGDVTYGMDLR
SSHEGFSNEDDDDTNYCTDDIFSSFLNSLINEDAFNSPNLLQQQQLQPNSTSTATDCDAL
ISSTTAFTFGPGWDAPSVASTSSSDHNDPKLTNEKVEKQF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacccttcatcaaaaccacaagcagcagcagcagcaaatagtacaggagctgga
gcttcttcaaacaagacgaaggtgggtttaaagagaggtccgtggacacccgaagaagac
gagctattaagcgattacatcaagagagaaggcgaaggccggtggaggactctgcctaag
aaggcaggtctcctccgctgcggcaagagctgccgtctccggtggatgaattacctccgt
ccttccgttaagcgaggccacatcgcctgggatgaagaagatctcatcctccgcctccat
cgcctacttggcaacaggtggtctttgatcgctgggagaattccaggacgaacggataat
gaaatcaagaactactggaacactcacctgagtaagaagttgattagccaaggaattgat
ccaagaactcacaagcctctggaacctaattactccgactccaacaatgaaaacaaagct
tcatcctccaaactgcatcacgcagtagctgatcatcccagttccagtagctacgagcct
tctgcagcagtagttatcaaagactcgagagatgcaagtactagcaacatccctatcgat
gggattgaatttaattctgacgatcagtaccaaaaccctgaaacaacagctggagaagtt
catgtgaacatgcagaatgctgatcatgagggggatgttacttatgggatggatttgagg
agcagtcatgaaggatttagcaatgaagacgatgatgataccaactattgcactgatgat
attttctcatcattcttaaattcattaatcaacgaggatgctttcaacagcccaaaccta
cttcaacaacagcagctgcagcccaatagcacgagcactgctacagattgtgatgctttg
atatcttccacaactgcattcacatttggtcctggatgggatgctccgtcggtggcttcc
acttcttcttctgatcacaatgatcccaagctcacgaatgaaaaagttgaaaagcagttc
tga
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