Coffea arabica (coffee): 113697893
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Entry
113697893 CDS
T11342
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
carb Coffea arabica (coffee)
Pathway
carb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113697893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113697893
Membrane trafficking [BR:
carb04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
113697893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
113697893
NCBI-ProteinID:
XP_071916520
UniProt:
A0ABM4VAG0
LinkDB
All DBs
Position
7e:complement(3807175..3813943)
Genome browser
AA seq
1458 aa
AA seq
DB search
MGCLNQQTAVNAVVRGPKDGSFRSSRVALACMVNSEIGAVLAVMRRNVRWGVLYADDDQV
EHSLIQSFKELRKKIFLWQHQWHSIDPVVYLKPFLDVIQSDETGAPITGVALSSVYKILT
LEILDSETVNVDKALHLIVDAVTSCRFEVTDPASEEVALMKILQVLLACMKNKASVHLSN
HHVCNIVNTCFRIVHQASSKGELLQRIARHTMHELVRCIFSHLPDIGDRPHALAEGSRMS
AETEVHVPKDTHILEGTQGVNANGSAKFDGKALPLKEASGNPAFTSASKVDEEIMTLGSV
EVAQNGADSMMDQYGIPCMVEIFQFLCSLLNVMEIESGVRSNPIAYDEDVPLFALGLINT
AIELAGASFGDHAKLLVLIQEDLFYNLMQFGLSMSPLILSTVCSIVLNLYHHLRTKLKLQ
LEAFFSRVLLKIAGSKHGSSYQQQEVAMEAIVDFCRQPFFMAEMYANFDCDISCSNVFED
LANLLSKSAFPVNSPLSALNTLALDGLIAMIEGISERIGHESSAPERSPIQPEEYRPFWT
VTCDNYGEPNCWVPFVYKKKQIKKKLMIGADHFNLDPKKGLEFLKGVNLLPDTRDTRSVA
CFFRYTTGLNKNLVGEFLGSHDEFCIQVLKEFAQSFDFQDMNLDTALRIFLETFRLPGES
QKIQRVLEAFAERYYEQSPDILVNKDAVFVLSYSLIILNTDQHNSQVKKKMTEEDFLRNN
RAINGGSDLPREFLSQLYHSICENEIRMIPEQAAAASVMSRSHWISLVHRAKQSAPYIFC
DSGPHLDYDMFAILSGPTIAAISVVLDHVERDNVLHTCIDGYLTMAKISASYNSVDSLDD
LVVSLCRFTNLLIPSLNNEEFILAFGDDAKARMATVAVFTIANRYGDQIRSGWKNILDCI
FSLNKLGLLPARLASDAVDDSEVSSDQNLVRPPSSSPTTSTPSPVAPSRKSSGLMGRFTQ
LLYLDTEEPESYPTQEQVAARQRSLQTIQDSHIDSIFAESKFLQAESLSQLVQALLLAAG
RPRKANNSMEDEVTAVFCLELLIAITLNNRDRIMLLWQGVYEHIASVVQSTVMPCALVEK
AVFGLLRICQRLLPYKENLTDELLKSLQLILKLDARVADAYCEQITQEVMHIVKANAMQI
RSHMGWRTIISLLSITARHPEASEAGFETLSFIMSEGAHLSPANYVLCLTAARQFAESRV
GNVDQSIRSLDLMAGSLDCLVRWFYKTKEAMGEEAALKMAQDIWEMWLRLVQGLRKVCVD
QREEVRNHAILMLQRCLTGAEVMHIPVGLWSQCFDLVIFTLLDDLVEIAQQHSAKDYRNM
EGTLVLSLKLLSKVFLQLLHDVSQLASFSELWSRVLSCMERYMKVKFRGKRSEKIHELVP
ELLKNTLLIMKSSGLLVPSEEDNFWQLTWSSVKNLAPSLQLEVFSSDELEQLQQKTQTNG
CSPIQDGNVIVPPSETRA
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgggttgcttaaatcaacagactgcagtcaatgctgtggttagagggcccaaggatggt
tcctttaggtcttcaagggttgccttggcatgcatggtaaattcagaaattggtgcagtt
ttggctgtgatgaggagaaatgtaagatggggagtgctttatgctgatgatgatcaagta
gagcactctctcatccagtctttcaaggaactacgtaaaaaaattttcttatggcaacat
cagtggcattcaattgatccagtggtttaccttaaaccatttctggatgtgattcaatct
gatgaaactggggctccaattactggcgttgctttgtcgtcagtttataaaattttaacc
ctggagatacttgattcagagactgtgaatgttgataaggctttgcatctaattgtcgat
gctgtaaccagctgccgctttgaggtgactgatcctgcttctgaagaagtggcactaatg
aagatacttcaagttcttttagcttgcatgaagaataaggcatcagttcatttgagtaat
catcatgtttgcaacatagtgaacacatgttttcggatagttcatcaggcaagctctaaa
ggtgaacttttacagagaatagcacgccacactatgcatgaattggttcggtgcatcttt
tcgcacctgcctgacattggcgacagaccgcatgcgttggctgagggaagcagaatgtct
gctgagaccgaggttcatgtgccaaaagatactcatattttggaaggtacgcaaggtgtt
aatgccaatggcagtgcaaaatttgatggtaaggcactacctcttaaagaggcttcaggt
aatcctgcattcacatcagcaagcaaagtggatgaggaaattatgacacttggctcagtg
gaggttgctcagaatggagctgactctatgatggatcaatatggtatcccttgcatggtg
gagatatttcaattcttgtgctctctcttgaatgtgatggaaattgaaagtggtgtgaga
tccaatcctattgcttacgatgaagatgtgcccttgtttgctttaggtttgattaacacg
gcaatagaattggctggggcttcctttggagatcatgctaaattattggtcctgatacag
gaagacttgttctataatttgatgcagtttggcttgtcaatgagtccattgattctctca
actgtttgcagcatagttctcaatctgtatcatcatctgcgtaccaagttaaaactgcag
cttgaggctttcttctctcgagtactattaaagattgctggaagcaagcatggatcttct
taccaacagcaggaagttgccatggaagccattgtggatttctgccggcagccttttttt
atggctgagatgtatgccaattttgactgtgacatatcctgcagcaatgtatttgaagat
cttgccaacctgttgtcaaaaagtgcctttccagtgaacagccctttgtccgcattgaat
actcttgctctggacggtctgattgccatgattgagggtatatctgagaggattggacat
gagtcatcagccccagaaaggtctccaatacaacctgaggaatatagaccattttggacg
gtgacgtgtgataattatggtgaacctaattgctgggtcccctttgtttataagaagaag
caaattaagaagaaattgatgattggtgctgaccacttcaaccttgatcccaagaagggc
ctggaatttcttaaaggtgtaaatttgttgccagatacacgtgacacccgtagtgtagca
tgcttcttcagatatacaactggtttaaataagaatcttgttggggaatttctggggagt
catgatgagttttgtattcaggtgcttaaggaatttgcgcagtcatttgatttccaggac
atgaacttggacactgcactgcgcattttcttggaaactttcagattgcctggagagtct
cagaagatacagagagtgttagaggcatttgcagaaagatattatgagcaatcaccagat
attctggttaacaaagatgctgtatttgtgttgtcatattctctaataatactcaacaca
gatcaacacaattcgcaggtgaagaagaagatgactgaagaagatttcctccgtaacaat
cgtgcaataaatggaggaagtgatctccctcgagagttcttgtctcaactttaccactca
atctgtgagaatgagatccgaatgattccagagcaagctgctgctgcttcagtaatgtca
cgaagtcattggatcagtttagtgcacagagcaaaacaatctgctccatacattttctgt
gattctggtccacatcttgactatgacatgtttgctattttgtctgggcccacaattgca
gctatctctgtggttttagatcatgtggagcgggacaatgttttgcatacatgtattgat
ggatacttgacaatggctaaaatttcagcgtcctataattctgtcgattcattagacgat
ttggttgtgtctctttgtagattcactaatttgttgattccatccttaaacaatgaagaa
tttattttagcttttggggatgatgctaaagctaggatggcaactgtggctgttttcacg
atagcaaacaggtatggtgatcaaattcgctcaggatggaaaaacattctggattgcata
tttagcctgaataagctgggtcttcttcctgctcgacttgccagtgatgctgttgatgac
tcagaggtttcttctgatcaaaacctagttagacccccgtcatcttccccaacaacatct
actccatctccagttgccccatcgaggaaatcctctggcctgatggggcggtttactcaa
ctgctataccttgacacagaagaacctgaatcctatcctacccaagaacaggttgctgct
cgtcagcgttctcttcagacaatccaagactctcacatagatagcatcttcgcagagagt
aaatttttgcaagctgagtccctatcacagcttgttcaggctcttctcttagctgctggg
cggcctcgcaaggcaaacaattctatggaagatgaagtcacagcagttttctgtctggaa
ttgttgattgcaatcacgctaaacaaccgggacaggatcatgcttctatggcaaggtgtt
tatgagcacatagccagtgttgttcagtcaactgtgatgccttgtgctctggtggaaaag
gctgtctttgggctcctccggatatgtcaacggttgcttccatacaaggaaaatctgact
gatgagctactcaagtctttgcaactaatactgaaacttgatgctcgggttgctgatgca
tactgtgagcagatcacacaggaagtcatgcacattgtgaaagcaaatgcgatgcagata
agatcgcatatgggatggcgcactattatatcactgctatctatcacagctcgacatcca
gaggcatctgaagcaggttttgagacattatcatttatcatgtccgaaggggcccatctg
tcgcctgcaaattatgtactttgtctaactgccgccaggcagtttgccgagtcccgagtt
ggtaatgttgaccagtcaatcaggtctttagatctgatggctggttcactggactgcttg
gtacgatggttttacaaaaccaaggaagccatgggggaggaagctgccctaaaaatggct
caggatatatgggaaatgtggttgaggctggtacaaggtcttaggaaagtctgtgtagac
caaagagaagaggtaagaaatcatgctattttgatgttacagaggtgcttaacaggtgcg
gaggtgatgcatatcccagttggtttgtggtcgcagtgttttgatctagtcatctttaca
ttgcttgacgatttagttgaaattgcacagcagcattctgcaaaggactatcgtaatatg
gaagggacacttgttctgtctctgaagctcttgtctaaagtgtttttacagttattgcac
gatgtctcacagttggcatccttcagcgaattatggtcgagggttcttagctgtatggaa
agatatatgaaagtgaaattcagagggaaacgaagtgaaaagatccatgaattagtccct
gagctcctgaaaaacacattgcttattatgaagtcaagtgggcttctcgtgccaagtgaa
gaggacaatttttggcagttaacttggtcgagcgtgaaaaatttggccccatctttgcaa
ttagaagttttttctagtgatgaattggagcagctgcagcagaagacgcaaacgaatggt
tgtagtcctatccaagatggaaatgttatagttccccctagtgaaacaagagcttga
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integrated database retrieval system
