Coffea arabica (coffee): 113698030
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Entry
113698030 CDS
T11342
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27-like isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
carb01002
]
113698030
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113698030
04121 Ubiquitin system [BR:
carb04121
]
113698030
Enzymes [BR:
carb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113698030
Peptidases and inhibitors [BR:
carb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113698030
Membrane trafficking [BR:
carb04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
113698030
Ubiquitin system [BR:
carb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113698030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113698030
NCBI-ProteinID:
XP_027073498
UniProt:
A0A6P6T575
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Position
7c:complement(13292954..13298808)
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AA seq
594 aa
AA seq
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MKIQGRIDIQSLVEKLKFGAKFLPQVNWSSPTGLHISVAASLLGATGLILAIKDGKVGSF
INFGLPWSSSDGLVSSDKHWVVPGLQNLGNNCFLNVVLQALASCSSFQRFLDIVFEKYKF
PSVEESAKALPLTAAVASLLEELCMVQYVRSVRSPRKVMVAMETYMPSFSLTSQQDAEEA
FFHLLASLREELSESYVHWTSSLADATVLNNSRILAPRKRLRESEQQRWRRSFLGPFDGI
LGSILTCQSCSFQISLDFQLFHSLHLSPVLSSGGTIMTGCSLGSCLSQFFVSERLDNYFC
SHCWHNAAIKYLSLTRENKTDIEKLKLCSEDDSCDCKSLCSLRPLPWSNSYSRSFKQLSM
ARSPQILCVHLQRASVNLFGELVKIQGHISFPLILDLSPLMKRGLVIKSLEENLQRGQVL
SKCQPPFPCPMQPSMEHTTGLINCNGETANKFPLEAENPDHEQTVYDPPKNVHALKTWPK
MPGNGSSVDFMMHFRPIHSNDKISLEVDGPSTSTSSKDHTYRLVSVVQHFGKVGSGHYTV
YRRVKAETCDEDPIALLEPTHARWFCISDSEVHGVSEKDVLEAEASLLFYEKIH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcaaggaagaatagatattcagtcccttgtagaaaaattgaaatttggagcc
aaatttttgccccaagtgaactggagttcaccaaccgggcttcacatatcagtggctgca
agccttttgggtgctactggcttgatcttggctatcaaagatggtaaagttggaagcttt
atcaactttggtctaccatggtcatcatctgatggacttgttagttctgacaaacattgg
gttgtgcccggattgcaaaaccttggaaacaattgtttcttgaatgttgttttgcaggct
ttggctagttgttcgagttttcaaagattcctcgacatcgtctttgagaaatataagttt
ccatcagtagaagagagtgctaaagcattgcctcttactgctgctgtggcatccctgctg
gaagaactatgtatggttcaatatgtgagatctgtacgaagcccgcgaaaggtgatggtt
gcgatggagacttacatgccaagtttcagcttaactagccagcaggatgcagaggaagca
ttctttcatcttctcgcttctttgagggaagaattgtcagaatcttatgttcactggacc
agctccttggctgacgcaactgtactcaataattccagaattcttgctccaagaaagagg
ctaagggaatctgaacagcaaagatggcggcgtagtttccttggaccttttgatgggatc
cttggcagcatcttgacctgtcagagttgttcgtttcagatctctctggatttccaatta
tttcatagcttacacctctcgccggtgctcagtagtggtggtacaattatgaccggatgc
tccttggggagttgcctgagccagttctttgtttctgaacgacttgataattacttctgc
agtcactgctggcataatgctgctattaagtacctatccttgacacgtgaaaataagaca
gatattgaaaagctgaagctctgtagtgaggatgattcctgtgactgtaaaagtctctgt
tctcttagaccattaccctggtcgaacagctactcaagaagtttcaagcagctgagtatg
gcacgtagcccacagattctgtgtgttcacctgcaacgtgcttcagtgaatctttttgga
gaactagtaaaaattcagggtcacatctcttttccattgattttggacctctcacctctt
atgaagaggggattagtaataaagagcttggaagaaaatttgcaaagagggcaagtactg
tccaaatgtcagccacccttcccttgtccaatgcaaccaagtatggaacatactacaggt
ctgataaattgcaatggggagacagcaaataaatttcctttggaagcagagaatccagat
catgaacaaactgtctatgacccgccaaaaaatgttcatgctctcaaaacttggccaaaa
atgcctgggaatggaagctctgtggacttcatgatgcactttaggcctattcattctaat
gacaagattagcttagaggtagatggaccttccacttctacatcttccaaagatcatacc
tacaggctagtttcagtcgtccagcacttcggaaaagttggaagcggtcattacactgtt
tacagaagagtcaaagctgagacttgtgatgaagatccaattgcgctcttagaaccgact
catgcacgatggttttgcatctcggattctgaagtgcatggtgtctcagagaaggatgtt
ctggaagcagaggctagtttgttgttctatgagaaaatccactga
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