Coffea arabica (coffee): 113698160
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Entry
113698160 CDS
T11342
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
KO
K14962
COMPASS component SWD2
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113698160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113698160
03036 Chromosome and associated proteins [BR:
carb03036
]
113698160
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113698160
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
113698160
COMPASS/SET1 complex (yeast)
113698160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113698160
NCBI-ProteinID:
XP_027073667
UniProt:
A0A6P6T6P2
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Position
7c:complement(767765..773655)
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AA seq
336 aa
AA seq
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MTSLPELNDDTVRSMAVAAVFSDFGGKISSLDFHRTSDLLVTASEDDSVRLYDIANGKLL
KTTYHKKHGAERICFTHHSSSVICSSRYNLDSRESLRYLSMYDNRCLRYFKGHEKRVVSL
CMSPINDSFMSGSLDHTVRIWDLRVNACQGILRLRGRPTVAYDQQGLVFAVSMEGGAIKL
FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLATKSNNIYVLDAYGGEKRCGFSL
DPSPNTAIEATFTPDGQYLVSGSGDGTLHAWSIRTRNKVACWDNDIGVASCLKWAPRRVM
FAAASSVLTFWIPNPAKPTTEPGNTHAEAGKPEQTT
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactcccagaactcaacgacgacactgttcgcagtatggcagttgcagccgta
ttctcggattttggtggaaaaataagttcacttgattttcatcggacaagtgatttattg
gttacagcgagcgaggatgattcggtcagactgtatgacattgccaatggcaagttgttg
aagaccacctaccataagaaacacggtgctgagaggatatgcttcacccatcactcaagc
tctgttatatgttcatcaagatacaacttggattccagagaatctctgcgctacctatcc
atgtatgacaatcgctgccttcggtactttaagggacatgagaaaagggttgtgtcactg
tgcatgtctcctattaatgacagctttatgtctggttctcttgatcacactgtccgtata
tgggatctccgagtaaatgcatgccagggaatattacgtctacgtggtaggccaactgtt
gcatatgatcaacaaggtcttgtctttgcagtatcaatggaagggggtgcaatcaaattg
tttgattctagatcatacgacaagggaccatttgatactttccttgttggtggagataca
gctgaagtctgtgatattaagttcagtaatgatggtaaatcaatgctgttggctactaaa
agtaacaacatatatgttcttgacgcatatggaggcgagaagcgttgtgggtttagtctg
gatccttcccccaatacagctatagaggctacatttacaccagatggccaatatttggtt
tcaggttctggagatggaactctccatgcttggagcataagaacaagaaataaggttgcc
tgctgggataatgacataggcgttgcctcatgcttgaagtgggctcctcgtagggtcatg
tttgctgctgcatcttcggttcttaccttttggattcctaatcccgcaaagccaactact
gagcctggaaatacgcatgccgaagcaggaaaaccggagcaaactacataa
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