Coffea arabica (coffee): 113698172
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Entry
113698172 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113698172
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113698172
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113698172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
Prok-RING_4
zf-RING_5
zf-RING_UBOX
zf-RING_16
zf-ANAPC11
Cys_Knot_tox
zf-C2H2_3
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
113698172
NCBI-ProteinID:
XP_027073684
UniProt:
A0A6P6T5U8
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All DBs
Position
1c:31164306..31172316
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AA seq
252 aa
AA seq
DB search
MSWPSPMEFHYANSAPGMPYNSIGSFVDFFGGLTYDHVNFIFAEAHPYAQDSVYPSMNTS
FHKFAHSEPGSFYCEYGHGYVMNDHTQTSEIGEYSRNLEDPSSMIQEQTGADHMQREENS
ISPSHANPVECPRSHQNTHDYEVVWQDNIDPDNMTYEELLELGEAVGTQNRGLSQELISL
LPVSKFKCGLFSRKKSRHERCVICQMEYKRGDRQMTLPCKHLYHVGCGSRWLSINKACPI
CYKEVSLNGSKK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagctggccctcgccgatggagtttcattatgcaaactctgcccctggcatgccttat
aattcaattggaagctttgtggatttctttggaggccttacttatgaccatgtcaatttt
atttttgcagaggctcatccttatgcacaggatagtgtatacccttcgatgaacaccagt
ttccacaaatttgcacattctgaacctgggagtttttactgtgagtatggccatggttat
gtgatgaatgatcatactcaaacgtctgaaatcggtgaatacagtaggaatttagaggat
ccttcaagcatgatccaagaacaaactggagctgatcacatgcagcgagaggagaattca
atctccccttcacatgctaatcctgtggagtgtcctcgaagtcatcagaatactcatgat
tatgaggtcgtttggcaagacaacattgatcctgataacatgacctatgaggagttactt
gaattgggtgaagctgttggcactcaaaatagaggtctttcgcaggaacttatttccttg
cttccggtctccaagttcaagtgtggcttattttcacgaaagaaatcaagacatgagagg
tgtgttatctgccagatggaatacaagcgaggtgatcggcaaatgactcttccatgcaag
cacttgtatcatgtaggttgtggcagcagatggcttagcatcaacaaagcttgtccaatt
tgttacaaagaggtttcgcttaatggatcgaagaaataa
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integrated database retrieval system
