Coffea arabica (coffee): 113698210
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Entry
113698210 CDS
T11342
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17-like isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113698210
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113698210
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Meiosis-specific proteins
Others
113698210
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
113698210
NCBI-ProteinID:
XP_027073731
UniProt:
A0A6P6T6X6
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Position
7c:832333..841440
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AA seq
1212 aa
AA seq
DB search
MDNYTLKSVLDLPAPFHSIYGFRYFNSLQSECFSACYLSDINMVISAPTGSGKTVLFELC
ILRVFSRFISAEEKLIHLNGTMKTVYVAPSKALVQEKLHEWNQKFGSWGINCLELTGDNE
HYNMRNIQDADIILTTPEKFDAVTRYRIKDGGLGFFGDIALVLIDEVHLLNDPRGAALEA
IVSRIKMLARKTEMKSSPLAHVRFLAISATIPNIDDLAEWLMVPNQGIKRFGEEMRPVKL
TTKVLGYTPAKNDFLFEKRLQNYIFDILMQYSRGKSALVFCSTRKGAQEAAQRLAQIAMT
YGHSNPFTKSREQEERLRDASLSCSDKQMQSYILYGVGYHNGGLSMKDRNLIEGLFLNGD
LQILCTTNTLALGVNLPAHTVVIKSTQHFNKEKGKYMEYDRSMILQMCGRAGRPPFDDTG
TVIIMTRKETVHLYENLLNGCEMVESQMLPCMTEHLTAEIVQLTISDITKAIEWMKCSYL
YVRMKKNPEIYSVKKGLPANRIEKHMQEICVQKINELSRYQMIWTDEDGFLLKPLEPGKL
MTKYYLKFDTMKHIMLAPANCSIEDALHIICRAEEFAWIQLRRNEKRLLNDINIDKDGRL
RFHIHDDKGKVKKRVQTREEKIFILANDCLTGDPLVHDLSMSQDMNSICANGCRIAKCMK
DYFIHKKNYKGALNSSLLAKSLHQKLWDDSPYLLKQLPGIGLVTAKALHSMGVNSFETFS
GADPRKIEMVTGRKFPFGNHIKESLLSLPPKVEMKFEETTCQKQGKSQLVVTLTRLSESA
QLTKRYYADMIVSIEDDNVILFHEKIRVDEFLSPYSAIILLPSQHQGKLTVNADLMFEEF
LGIDIHQSIIIRKENDFNAAHKHASKYAYTPQHKDVCIIKDGNDCPSQALAGVPNSNESK
EPADNMPTFRLLDEDSDEGASRVDTEDDECKIITEKTVFDHIREKAKTFPALEISNNACS
PSLETLTLIRKRTREKQLELDNSFEILEEKGTSKDSHEILVIPTAASGDLEPFVDKDASP
GNFLVSNTGNCRPVREDFEPETLDEGSIFDHIRKKAKTFPLLGNLKATEFKNRSNHFNSG
NEGTEVRSLYEALQDPVIISHPDALRRIPTAKGVTEQEDFLFSGNSRDIGDKIAIDSKAT
LNISKEARSNEELAPGIPLVRRLVKPVACTESYQPLPSSQALLHRQCSLFVKSGEVKKEN
SFLGFESVFSFL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggataactacacgctgaaatcagtgttggatttacctgctccttttcattcaatctat
ggtttcagatactttaactcattgcagagtgaatgcttctccgcttgttacctttcggac
ataaacatggttatttcagctcctactggaagtggaaaaacggtgctctttgagttgtgc
atcctgagggttttttcgaggttcatctctgcggaggaaaaactcattcatttaaacggg
acaatgaaaaccgtctatgtagctccatcgaaggctttagtacaagagaaacttcatgag
tggaaccaaaagtttgggtcatggggtattaattgcctggaactgactggtgacaatgaa
cattacaacatgaggaacatacaggatgcagacattattcttaccacccctgagaagttt
gatgctgtaactcgttatcgcataaaagatgggggcttgggcttttttggtgatatagcc
cttgtgcttatagacgaagttcatctgttgaatgatcctcgtggagcagctttggaagca
atagttagtcggatcaaaatgcttgctcgcaaaactgaaatgaaatcaagtcccctagcc
catgtccgctttcttgctatatctgctaccattccaaatattgatgatcttgctgaatgg
ttaatggttcccaatcaaggaattaaaaggtttggggaagaaatgaggcctgtaaagttg
actaccaaagtcttgggatacaccccagcaaaaaacgacttcttgtttgagaagcggctt
cagaactacatattcgatatactaatgcaatattctagagggaaatctgcacttgtcttt
tgctcaactagaaaaggagcacaagaagcagctcaacgactggcacaaatagcaatgacc
tatggtcattcaaaccctttcaccaaaagcagagaacaagaggaaaggctaagggatgct
tcactatcatgcagtgacaaacaaatgcaatcttacatcctctatggtgttggttatcac
aatggcggactttccatgaaggatcggaaccttatagaaggtcttttcttgaatggcgat
ctgcaaattctctgcacaacaaatacgcttgccctcggagtcaacctaccagctcacact
gtagtaattaagtcaacccagcactttaacaaggaaaaggggaaatatatggaatatgac
cgatccatgatactgcagatgtgtggaagggcaggccgtcctccatttgatgacactggg
acagttataatcatgaccaggaaagaaacggtacatttgtatgaaaatctgttgaatgga
tgtgaaatggtggaatcacaaatgcttccatgcatgacagagcacctaactgccgagata
gttcaactgaccatctcagatataacaaaggcaattgaatggatgaaatgctcatatttg
tatgtgagaatgaaaaagaaccctgagatttattcagtgaagaaagggctccctgctaac
cgcattgagaagcatatgcaagaaatttgtgttcaaaagattaatgagttatcacgctat
caaatgatctggactgacgaagacggtttcctattaaagccactagagcctggaaagttg
atgacaaaatattatctgaaatttgatacaatgaagcatattatgctggcacctgcaaac
tgcagtatagaagatgcacttcacataatttgccgtgcagaagaatttgcctggatacaa
ctcaggcgcaatgagaagagactattaaatgacataaacattgacaaagatggtcggctc
cgctttcatatccatgatgataaaggaaaagtgaagaagcgggttcaaaccagagaagaa
aagatattcattctggcaaatgactgcctgactggggatcctttagtacatgatttatca
atgagccaggacatgaactctatatgcgcaaatgggtgtagaattgcaaagtgcatgaaa
gactactttatccataaaaagaattataagggtgcactaaattcatcacttctggcaaaa
tctttacatcagaaactctgggatgatagtccatacttgctgaaacaattaccaggcatt
gggttggtgactgctaaggcacttcactcaatgggcgtaaattcttttgaaaccttttct
ggtgccgatccaaggaagatagagatggtcaccggtagaaaattcccttttggtaaccac
attaaggagtcgttgctatctctgccaccaaaggttgagatgaaatttgaggagaccacg
tgccaaaagcaagggaagtcccagctagtggtaacactaacgaggctatcagaatctgca
caactaactaaacgatattatgctgacatgatagttagcattgaagatgacaacgttatc
ctgttccatgaaaagataagagtggatgaatttttgagcccatatagtgcgataattcta
ctaccaagccagcatcaaggaaaactgactgtaaatgccgatctcatgtttgaagaattc
cttggtattgatattcatcaaagcatcataataagaaaggagaatgacttcaatgctgct
cacaagcatgcatccaagtatgcttacacccctcagcataaagatgtgtgcatcataaaa
gatggcaatgattgtccatctcaagcactagctggagtgcctaattccaatgaatccaaa
gaaccggcagataatatgcccactttcagacttctagatgaagactcagacgaaggtgca
tctcgtgtcgacaccgaggatgatgaatgcaagattatcactgaaaaaacagtatttgac
cacatacgagagaaggctaagacttttcctgctttggaaatctccaacaatgcatgttcc
ccctcacttgagacgttaacactcatcagaaagcgaactcgtgagaagcaacttgaactt
gataattcctttgagatcctggaagaaaagggtacaagtaaagattctcacgagattctg
gttattccaaccgctgcatcaggtgacctggaaccattcgttgacaaagatgcatctcca
ggcaattttcttgtgagcaacacaggtaactgtcgtcctgtacgtgaagattttgaacct
gaaacacttgatgaaggatcaatttttgaccatatacgaaaaaaagctaaaaccttccca
ctgcttggaaatttgaaggctactgaattcaagaataggtctaatcattttaattctgga
aatgagggaactgaagtccgtagtctttatgaagccctgcaagatcctgtgattatttca
catccagatgccctgagaagaataccaaccgctaaaggagttacagagcaggaagacttt
ctgttttctggcaactcgagagacattggtgacaaaatagctattgattccaaagctaca
ctaaatattagcaaagaggcaagatcaaatgaagagcttgctcctgggattccgttggta
agaagactagtgaaacctgtagcttgcacagagagctaccagcctctaccatcttctcaa
gctttacttcacagacagtgttctttatttgtgaaatcgggggaggtcaagaaagaaaat
tccttcctaggatttgaaagtgtgttttcgtttctttaa
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