Coffea arabica (coffee): 113698293
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Entry
113698293 CDS
T11342
Name
(RefSeq) serine/threonine-protein phosphatase PP2A-2 catalytic subunit isoform X1
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
carb04136
Autophagy - other
carb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113698293
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
113698293
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113698293
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
113698293
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113698293
04131 Membrane trafficking [BR:
carb04131
]
113698293
03036 Chromosome and associated proteins [BR:
carb03036
]
113698293
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
carb04147
]
113698293
Enzymes [BR:
carb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113698293
Protein phosphatases and associated proteins [BR:
carb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
113698293
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113698293
Membrane trafficking [BR:
carb04131
]
Autophagy
Other autophagy associated proteins
Others
113698293
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113698293
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113698293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
IBV_3B
Motif
Other DBs
NCBI-GeneID:
113698293
NCBI-ProteinID:
XP_027073871
UniProt:
A0A6P6T7W0
LinkDB
All DBs
Position
1e:4777859..4785904
Genome browser
AA seq
317 aa
AA seq
DB search
MSSDSAVPSPGSVHGGSLDEQISQLMQCKPLSEQEVRLLCEKAKEILMDESNVQPVKSPV
TICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRIT
ILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSP
SVETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTN
NLKLIARAHQLVMEGFNWAHDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPA
PRRGEPDVTRRTPDYFL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgattcggctgtgccgtctcccggttctgttcatggcggcagcctcgatgag
cagatttctcagcttatgcagtgcaaacccttgtccgaacaagaggtgagactgctatgt
gagaaggccaaggagatcttaatggatgagagcaatgttcaacctgtgaagagtcctgtg
accatatgtggtgacattcatggacaattccacgatcttgctgagcttttccgtattggt
ggcaagtgtccagatacaaattatttgtttatgggagattatgtagatcgtgggtattat
tcagttgaaactgtaactcttctggtagccctcaaagtgcgttaccctcaacgaattact
attctaagaggaaatcatgagagtcgacagattactcaagtatatgggttttatgatgaa
tgcctaaggaaatatggcaatgcaaatgtctggaagatttttactgatctatttgactac
tttccactcactgcgctggttgagtcagaaattttctgtctgcatggagggttgtctccg
tcagttgaaactctagacaacatacgaaatttcgatcgtgtgcaagaagttcctcatgag
ggacccatgtgtgatcttttgtggtctgaccctgatgaccgttgtggttggggcatttca
ccccgcggtgctggatatacatttggccaggacatatcagagcaatttaatcacaccaac
aatttaaagcttattgctagggcacatcagttggttatggaaggattcaattgggctcat
gatcaaaaagttgttaccatatttagcgcaccaaattattgctatcgctgtggaaacatg
gcgtccatcctggaagtggatgactgcaaaggccacacatttattcagtttgagcctgct
cctcggagaggagagccagatgtaactaggagaacaccagattactttttatga
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integrated database retrieval system
