Coffea arabica (coffee): 113698793
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Entry
113698793 CDS
T11342
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113698793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113698793
03041 Spliceosome [BR:
carb03041
]
113698793
03032 DNA replication proteins [BR:
carb03032
]
113698793
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
113698793
Spliceosome [BR:
carb03041
]
Complex A
U1 snRNP components
Sm proteins
113698793
U2 snRNP components
113698793
Complex B
U1 snRNP components
113698793
U4/U6.U5 tri-snRNP components
113698793
Complex C
U2 snRNP components
113698793
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113698793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113698793
NCBI-ProteinID:
XP_027074540
UniProt:
A0A6P6TIK2
LinkDB
All DBs
Position
7e:9262419..9269418
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEATGHIVTVELKSGELYRGSMVECEDNWNCQLENITFTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSALGVGRGRAVAMRARAQVAGRGA
PPGRGVVPPVRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtagcttaggtataccggtgaagcttctacacgaagccacaggacacatcgtg
accgtagagctgaagagcggagagctctatagaggcagcatggttgaatgcgaagacaat
tggaattgccagctcgagaacatcactttcacagctaaggatggcaaggtatcacaactt
gagcatgttttcattcgaggaagcaaagtcaggtttatggtgattcccgatatgcttaag
aatgctccaatgttcaaacgtctagaagctagaatcaagggcaagggttcagcacttggc
gttggacggggacgtgctgttgccatgagagccagggctcaggttgctggtcgtggagct
ccacctggcaggggcgttgtgccacctgtaaggaggtga
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