Coffea arabica (coffee): 113699059
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Entry
113699059 CDS
T11342
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113699059
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
113699059
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
113699059
NCBI-ProteinID:
XP_027074914
UniProt:
A0A6P6T971
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Position
7c:6127081..6133881
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AA seq
666 aa
AA seq
DB search
MDGNRNNFLKQRPSAHFKKKAGPKKGKWHNSGHEESSEDSLSSDTVYRILCQSRKIGSVI
GKGGGIIKALREETQAKITVADAVPGSDERVILIVSPSAKLARRQNADKDGDDQDTDSKE
HLMEPHCAAQAALLKVHDRIVEEDLGGADNDDKNEIVVTARLLVPNNVVGCLLGKKGDVI
QRLRGETGASIRVLPADHLPSCAMNTDELVQISGKPAVAKKALYEVATLLHQNPRKDKLP
LSFPAYGTQGFHPSGPPLANMPPPGNLTWSQRNHDDRGMPMPWPERYGNLPSGIGSDFDA
FPPVGGEEAPSEFSIKILCSAAKIGGVIGKGGFNVKQLQQETGASIQVENVSPESDERVI
RVSSFEVLLNPRSQTIDAILHLQNKTSECNEKGVITTRLLVPSSKVGCILGQGGHVINEM
RRRTLADIRVFSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRTRCLRDANPKGE
PAPSRSVSGYVPSGNLPGRDPLLSGGIGAGSSGRYEFFKGRPHEYESPRYPVPPSAMGYS
DVKIHNNTVGSMMGPGRSSVGEIAVTRLKLQDSLSGPGHLGDFWRSSDHLNAAQSVVQAF
GSPAGKSNNFQRDPYQSYRAQQGIYHGTNASHNSYQNLNAQQAPYQNINMQQAPYQNIGA
QGSYQY
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaacaggaacaattttttgaagcaacggccgagcgcacacttcaagaaaaaa
gcaggtcctaaaaaaggaaaatggcataattctggccatgaagagtcctctgaagattca
ctttcttcggacactgtttaccggatactttgtcagtctaggaagataggtagtgttatt
ggaaaaggtggtggtattatcaaagccctgagagaggagacccaagcgaagatcacagtt
gctgacgctgttcctggatcagatgaaagagtcatacttattgtcagtccttccgcaaaa
ctagcaagaagacagaatgctgacaaggatggtgatgatcaggatactgattcaaaagag
catctgatggagccgcattgtgcagcccaagctgctctcttgaaagttcatgacagaatc
gtcgaggaagaccttggcggggcagataatgatgacaaaaatgaaatcgtggtcactgca
cggcttcttgttccaaataatgtggttggatgccttttaggtaaaaaaggggatgtcata
cagagattgcgtggtgagactggtgccagcatacgtgtgcttccagcagaccatcttcct
tcctgcgccatgaatacggatgaattggtgcagatatcaggtaaacctgcagtggcaaag
aaagctctgtatgaagtggcaactttgttgcatcaaaatcctcgcaaggacaaacttcct
ttaagttttcctgcttatggtactcaaggttttcacccctctggtcctcccttggcaaat
atgccgcctccaggaaatttgacttggtcccagcgtaaccatgatgaccgtggtatgcct
atgccatggccagaaagatatggaaatctgccttctggcattggaagtgattttgatgct
tttcctcccgtcggtggtgaagaagctccgtcggaattttcaataaaaattttgtgctct
gctgcaaagattggtggagtaattggtaaaggaggcttcaatgtgaaacaattacagcaa
gagacaggagctagtattcaagttgagaatgtttccccagaatcagacgagagagtaatt
cgtgtctcctcctttgaggttcttttgaatccaagatcacaaactattgatgcgattctt
catcttcaaaataaaactagtgagtgtaatgaaaaaggagttatcactacacgacttcta
gttccatcgagtaaggttggctgcattcttgggcaaggaggtcatgttatcaatgagatg
agaaggagaactcttgcagatatacgtgtattttccaaggaagacaagcccaagtgtgcg
tctgacgatgaagaacttgtgcagatatcagggaattttggtgttgctaaagatgcccta
gccgagattgcatcaagactccgaacaagatgccttcgagatgcaaatcctaaaggtgaa
cctgctccttccagatcagtctccgggtatgttccttcagggaacttaccaggtagagac
ccgctcctatctggtggcataggagctggcagctcgggtagatatgaattttttaagggc
cgtcctcatgaatatgaatctccacggtatccagtccctccaagtgctatgggatacagt
gatgtgaagatccataacaatactgttggttcaatgatgggacctggcaggagcagtgtt
ggtgagattgctgtcacgaggctgaagcttcaggactctctgtctggtcctggccatctt
ggcgacttttggcgttcttctgatcacttaaatgctgcacaaagtgtggttcaggctttt
ggttcgccggctggaaagagcaacaattttcaacgggatccttatcaaagttatagggca
caacagggtatctaccatggcactaatgcttcacataattcgtaccaaaatctcaacgct
cagcaggctccatatcaaaacataaatatgcagcaggccccgtaccagaacattggtgca
caaggttcttaccagtactaa
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