Coffea arabica (coffee): 113699194
Help
Entry
113699194 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 2 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113699194
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113699194
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
113699194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-RING_UBOX
CCDC39
TetR_C_28
Halo_GVPC
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
113699194
NCBI-ProteinID:
XP_027075171
UniProt:
A0A6P6TBR9
LinkDB
All DBs
Position
1e:3334300..3344504
Genome browser
AA seq
867 aa
AA seq
DB search
MEDKEAEEPQKKRPRSDSDNSKRIDAALLQYQNQRLVQQLDMQKQELLDLEVKMKELRDK
QASYDSVLITINRLWNQLDGELILLGVRAGAGKTALHSSDQVDQLQGPMPSCRAEDIFLC
RLLQTNAIESTGSDGANGYIKEGLARRQASTRALMKLLEDAIEAQRAKIENISQAFHGKS
SAEDFVLILGKIDALMKEEVDNLHKVMDILHLKHKEYADEIQTCIENNSVDQSEIKRLNG
ELEESTAELEESRRKLVNLRMQKEGPSAVQSPISVVANGTASPEKPADRAKRLRGLKDSI
EETKVLAEDRLAEVQEMQEDNLSLLKQLQDLQNELKDDKYVYSSRPYTLLNDQLQHLNSE
ADRYKVLAESVQAERSLIIRREKELSVKAESAEAARKGVENLEAKIEELENQLHKSIVEK
NELEVKMEEALQDTGRKDVKEEFQIMASALSKEMGMMEAQLNRWKETAEESLSLHEEVQS
LKALVDSKTTEEKDLADRCAHQMGVIKSLKAYIEKMQKEKEELQIFVDMLGQQIYDNRDV
KEIKESEQRAHAQVKILRNTLDEHGLELRVKAAKEAEAACEERLAAAEAEKASLRDEVDA
CDRDVLKLQEAIKLKEAEAEAYISEIETIGQAYEDMQMQNQRLLQQVTERDDYNIKLVSE
SVNSKQAHNLLLSEKQALSKQLHRANAMLDSLKLRITQCEEQVKVHLMEASRYIEEDRQL
AADLETSKRELVDAEKEVKWLKSAVASSEKENEQIERKKAELLLELESEREARKKIQEEI
ATWNKSIDEMTSENEEAEILRLQDEIKECKAILKCGVCFDRPKEVLIAKCYHLFCNPCIQ
RNLEIRHRKCPACGMAFGQSDVKFVKI
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaggataaggaggccgaagaaccgcagaagaagcggccacgctctgactctgataac
tcgaaacggattgatgctgcacttctccagtatcagaatcagagacttgttcagcaatta
gacatgcagaagcaggagttgcttgatctggaagtcaaaatgaaagagctgagagataaa
caagcttcttatgattcagtgttgattacaattaatagactctggaatcagttagatggt
gaactaatccttctgggagtacgagctggggctggtaaaacagctctgcacagttctgat
caagttgatcaattacaaggtccaatgccatcatgtcgtgcagaagatatttttctttgc
aggctactgcaaacaaatgcaattgaaagcacaggaagtgatggagctaatggatatatc
aaagaaggcctagctcggcgtcaggcttctacaagggcattgatgaaattgttggaagat
gctattgaagctcagagagctaaaatagagaacatatcgcaggcttttcatggaaaatca
tctgcagaagattttgtgctcatactgggaaagattgatgctttaatgaaagaggaagtt
gataatctgcacaaggtgatggatatccttcatttgaagcataaagaatatgctgatgag
atccagacctgtattgagaacaactcagttgatcaatcagagataaagagacttaatggt
gagctggaagaaagcacggcagaacttgaggagagtagaagaaagcttgtgaatctgaga
atgcagaaagaggggccttctgcagtacaatcccccatatcagttgttgcaaatggaact
gcgtctcctgaaaaacctgcagacagggccaaacgtttacgaggactgaaggattcgatt
gaggagacaaaggtacttgcagaggatcgtcttgccgaggttcaagagatgcaggaagac
aatctcagcttgttaaagcagttgcaggaccttcagaatgaactgaaggatgataaatat
gtgtattcttctcgtccttacaccttactgaatgatcagctccagcacttgaattctgaa
gccgatcggtacaaagtgcttgcagaatcagtgcaggctgagagatctttgataatccga
agggagaaggaactttctgtaaaagcagaatctgcggaggctgcaagaaagggggttgag
aacttagaagccaagattgaggagttagagaatcaacttcataagtcgattgttgagaaa
aatgagctggaggttaagatggaagaagctttgcaggatacaggtagaaaagatgttaaa
gaagagtttcagattatggcttctgctttatcaaaggaaatgggaatgatggaagctcaa
ttgaatcggtggaaggagacagccgaagagtccctttccttgcacgaagaagtccagtcg
ctgaaagctttggtggacagtaagactaccgaagagaaagacttggctgatagatgtgca
catcaaatgggagtgatcaagtctttgaaggcatacattgagaagatgcaaaaggaaaaa
gaagagctacaaatatttgtggacatgcttggtcagcaaatatatgacaatagagatgtg
aaggaaattaaagagtcggagcaaagagcgcatgctcaagttaaaattttgagaaatact
ttagacgaacacggccttgaattgagagtgaaggctgctaaggaagctgaggcagcttgt
gaggaaaggcttgctgctgctgaagccgagaaagcttctttgagggatgaagtagatgcc
tgtgacagggatgttttaaagcttcaagaggctatcaaactaaaagaagctgaggcagaa
gcatatatttctgaaattgagactattggtcaagcatatgaagatatgcagatgcagaac
cagcgtctcttacagcaggtgactgaaagggatgattacaatattaagctggtatctgag
agtgtgaactcaaagcaggcacacaatttgttattgtctgagaagcaagcattaagcaag
caacttcatcgagctaacgcaatgctggactctctgaaattgagaattactcaatgtgaa
gagcaggtcaaagttcatctgatggaagcttcaaggtacatagaagaagatagacagctt
gcagcagacctagaaacttcaaaaagggaactagtggatgctgagaaggaagttaaatgg
ctgaaatctgctgttgcatcatctgaaaaggaaaatgagcagattgaacgaaagaaggct
gaacttctattggaattggagagtgagagagaagcaaggaagaagattcaggaagagatt
gccacatggaacaaatctatcgacgagatgacttctgagaacgaggaggctgaaattctg
agacttcaggatgaaattaaggagtgcaaagctattctcaagtgcggggtgtgttttgat
cgtcctaaggaggttcttattgccaagtgttatcatctgttttgcaatccatgcatccaa
agaaatctagagatccgccatcgaaagtgtccagcttgtggaatggcatttgggcaaagc
gatgttaaatttgtaaagatttga
DBGET
integrated database retrieval system
