Coffea arabica (coffee): 113699263
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Entry
113699263 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K13091
RNA-binding protein 23/39
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113699263
Spliceosome [BR:
carb03041
]
Common components
Common spliceosomal components
General mRNP proteins
113699263
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
113699263
NCBI-ProteinID:
XP_027075303
UniProt:
A0A6P6TA55
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Position
7c:13412740..13421518
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AA seq
597 aa
AA seq
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MDFDEYDYLEKTVEETNGPPSKTKETKDSAEKERDKEKGYRRKERGDEDEGDIDEDERDR
KNSSSKRSRGDDENGRDRDRERERDRDREKERSSLHRSRDRESERSSRDRDRDKEKREKE
RDRDRERDRERRDRDKEKERERDRDRDKEKEKDRERRDREKEKERDRETERSKEMERSRR
SRSRSRLDRERERELIRERERELEMRESRRFKEKKEAVEPEADPERDQRTVFAYQMPLKA
TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFFDSMSVPMAIALSGHLLLGQPVM
VKPSEAEKNLVPSNASSNSSVVGPYGATDRKLYVGNLHFNMTEFQLKQIFEAFGPVELVQ
LPTDPETGHCKGFGFVQFAQLEHAKAAQVLNGKLEIAGRTIKVSSVTDHVGVQDSGQKTA
DFDDDDGGGLALNAQSRAMLMAKLDRSGIASSVAGSLGVPALNGATPAQQSITMPMVAPT
AMSAPVLPAQVLMPPEPIGNPSECLLLKNMFDPATEMDPEFDLDIRDDVREECSNYGPVK
HIHVDKNSAGYVYLRFENVEAAARAQQAMHKRWFARRLISAIFLQPYEYDAKFKGAA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgattatttggagaaaaccgtggaagaaaccaacggtcctccg
tccaaaacgaaggagactaaggactccgccgagaaagagagagacaaggagaaaggatat
cggagaaaagagcgtggcgacgaggacgaaggtgatattgacgaggacgaaagagatcgg
aaaaattcctccagcaaaaggtcccgcggagatgacgaaaacggccgagatagagaccgc
gagagggaacgagatagggatagggagaaggagaggagctcgctgcaccggagtcgagat
agggagagtgagaggagttcgagggacagggatagagacaaggagaagagggagaaagag
agagatagggatagggaaagagacagggagaggagagacagagacaaggagaaggagagg
gagagggatagggacagggacaaggagaaggagaaggacagggagaggagggatagggaa
aaggagaaggaaagagatagggaaacggagaggtcgaaggaaatggagaggtcaaggagg
agccgaagcaggtccaggctcgatcgtgaaagggagagagagttgatcagggaacgagag
cgcgagctcgagatgagggaaagcaggagatttaaagaaaagaaagaagcggtggaacct
gaggctgacccagaaagggatcagagaacagtatttgcttaccagatgcccttgaaggca
actgagagggatgtttacgagtttttctcaaaagcaggaaaggtgagggatgtacgtctt
atcatggatcgaaattcgaggagatcaaaaggagttgggtacattgagttctttgattcc
atgtctgtgccgatggcaattgctctatctgggcatctacttcttggacagcctgttatg
gttaaaccatcagaggcagaaaagaaccttgttccatcaaatgcttccagtaattcaagc
gttgtgggcccgtatggtgcaacagataggaaactctatgttggaaatttacatttcaac
atgactgaatttcagcttaaacagatttttgaagcatttgggcccgttgaacttgtacag
ctgcctactgatcctgagactggacattgcaaaggttttggctttgttcaatttgctcaa
ctagaacatgcaaaggctgcgcaagttctaaatgggaaattggagattgctggtcgaact
attaaggtttcatctgttacagatcatgttggagtgcaagattcagggcagaaaactgcc
gattttgatgatgatgatgggggtggattggctttgaatgctcaatcaagagcaatgcta
atggcaaaactggatcgtagtgggattgcgtcaagtgttgctggttcccttggagtacct
gcgcttaatggcgcaactcctgcacaacaatccataaccatgcccatggttgcacctaca
gcaatgtctgctccagtacttccagcacaagttttaatgcccccagagcccattggcaac
ccaagcgagtgtttacttttgaagaatatgtttgatcctgcaactgagatggatccagaa
tttgatttggacatcagggatgatgtgcgtgaagaatgttcaaactatggcccggtgaag
catatccatgtggacaagaatagtgctggctatgtttatttgcgctttgagaatgtggag
gctgcagcacgcgctcaacaagccatgcacaagcgatggtttgctcgccgattgatttca
gcaatcttcttgcaaccatatgaatatgatgcaaaatttaaaggggctgcttga
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