Coffea arabica (coffee): 113699267
Help
Entry
113699267 CDS
T11342
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00900
Terpenoid backbone biosynthesis
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
Module
carb_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
113699267
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
carb01006
]
113699267
Enzymes [BR:
carb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
113699267
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
113699267
2.5.1.29 geranylgeranyl diphosphate synthase
113699267
Prenyltransferases [BR:
carb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
113699267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
113699267
NCBI-ProteinID:
XP_027075310
UniProt:
A0A6P6TAY0
LinkDB
All DBs
Position
7c:complement(6322320..6324024)
Genome browser
AA seq
386 aa
AA seq
DB search
MSLVNSSATWVQTPSIYNNLTSSRHNSANSYLYHPLKNKLPFSIFLPNPIIKTAIPFSSF
SIAAILTKEKTSAPQEESSKSKEEQIFPTPPSFDFKAYVLQKADSVNKALEEAVLLRDPL
KIHESMRYSLLAGGKRVRPMLCIAACELFGGQESVAMPSACAAEMIHTMSLMHDDLPCMD
NDDLRRGKPTNHKAFGEDVAVLAGDALLAFSFEYIATATKGVPSERIVRVIGELARSIGC
EGLVAGQMVDICSEGMSDVGLEHLEFIHVHKTAALLEGSVVMGAILGGANAEQVAKLRKF
ARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLLGIEKSREFAEKLNREAQ
DQLAEFDPEKAAPLIALANYIAYRDN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgtgaattcaagtgcaacatgggtacaaaccccttcgatttacaataatctt
acaagcagcagacacaattctgctaactcctatctttatcaccctctcaagaacaagctt
cccttctctatcttcctcccgaatcccatcataaaaacagccattcctttctcctctttc
tccattgctgccattctaaccaaagaaaaaacaagtgctccccaggaagagagcagcaaa
agcaaagaagaacagatttttccaactccaccttcattcgattttaaggcctatgtgctt
caaaaagctgattctgtgaataaggccttggaagaagcagttttgctcagggaccctttg
aagattcatgagtccatgaggtattcacttcttgctggtgggaagagagtccgccccatg
ctctgtattgcagcttgtgagctttttggtgggcaagaatctgttgccatgccttctgct
tgtgctgctgagatgattcatactatgtccttgatgcatgatgatcttccatgcatggat
aacgatgatttgaggagagggaagcccacaaaccataaggcctttggtgaagatgtggct
gttttagcaggggatgcgcttcttgcgttctctttcgaatatatagctactgcaacaaaa
ggggttccttctgaaagaattgtgagagtgattggtgagttggccaggtctattggttgt
gaaggactagttgcaggacagatggttgatatatgctctgaggggatgtccgatgtgggg
ttggagcatttggagtttatccatgttcacaagactgcagctttgttggagggttctgta
gttatgggggcaattttgggcggtgcaaatgctgagcaagttgccaaattaagaaagttt
gctaggtgtattggattgttgtttcaggtcgtggatgatattcttgacgtgactaaatct
tctcaggaactgggaaagacagcggggaaggacttggtggctgataagaccacttatcct
aagctactcgggattgagaagtctagagagtttgctgagaagttgaatagagaagctcaa
gatcaactagctgaatttgatcctgagaaggctgctcctttgattgctttagccaattac
attgcttaccgggataattga
DBGET
integrated database retrieval system
