Coffea arabica (coffee): 113700041
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Entry
113700041 CDS
T11342
Name
(RefSeq) nibrin homolog isoform X1
KO
K10867
nibrin
Organism
carb Coffea arabica (coffee)
Pathway
carb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113700041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carb03032
]
113700041
03400 DNA repair and recombination proteins [BR:
carb03400
]
113700041
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
113700041
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
113700041
BRCA1-C complex
113700041
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NCBI-GeneID:
113700041
NCBI-ProteinID:
XP_027076262
UniProt:
A0A6P6TE71
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Position
7c:8950322..8957272
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AA seq
571 aa
AA seq
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MVWGLFPVDPLPGEDRYYFFSKGTYKVGRKGCDIIINKDKGVSRIHAEIVIDEMVCFDNP
QRQSSDISSKVRIRDCSKYGTFVKKNLGSKEKVHEFPEKETMLKDGDLVSFGTGNATYRF
GYVPFIILYCCSKDLQVREPLRQKILSIGAFVAQEWSLKCTHVLIDDLVPLKEELIDAIV
AKKPFISFDWIEFIAGKNICTEIPSYLSYSPTLLLEEASVRVADPQSRENCLNGYTFLLE
SRNKYRHKDKLQPLLEVGGAKVASLEGFCIDSQVLEEEGIRHVVRVIPTGATSSSNGSQS
IRSLPSVNEMDLISVVLSGHLDPFIIVSPPVLVTSSCSTDETVVAESDEEVETATAVHTS
TAVYSVESSEHDSKEMTDLHMIESTQHDSGEETAINVIESTETDRKGNITLASVNAIEHE
IKEEIPCNNVSIKWSEGASFTGLRNRDGRTGSRLEKVEESECGNVDVIYSQDLIVRDSLS
ASVHSSTNDAVINFKCFRKRETPSGNSFSSLIPFSKDPYKESDYGNEEVAEYLKEEKKRK
QMEALAEDLFKYEVGRRRNAAGSRTGLFAYT
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggggtctctttcccgtcgaccctctcccaggtgaagatagatactactttttc
agcaaaggaacttacaaagttggtcgcaaaggatgtgatataatcataaacaaagacaaa
ggtgtctcgaggatacatgcggagattgtgatagatgaaatggtttgcttcgataatcca
cagagacaatcttcagatatatcctcgaaagttcggataagggactgctctaagtatgga
acatttgtcaagaagaatctggggtcaaaggagaaggttcacgagtttccagaaaaagag
acaatgctcaaggatggggacctggtttcttttggaactggaaatgcaacctatagattt
ggttatgttcccttcataattttgtattgctgttcaaaggatttgcaagtcagggaacca
cttcgacagaagatattgtcaataggtgcttttgttgctcaagagtggagtttaaagtgc
acacatgtgctgattgatgatttggttcctttgaaggaagagttaattgatgctattgtg
gctaaaaaacctttcatctcctttgactggattgagtttattgcagggaaaaacatatgc
acggaaattccaagctatttgtcttattctccgacacttttgctggaagaggcatctgtc
agagttgcagaccctcaatctcgagaaaattgtttgaatggatatacctttttgttggag
tcaagaaataagtatagacacaaggacaagttgcaaccactactggaagtgggtggtgca
aaagttgcttccctggaaggtttctgcattgatagccaagtattggaggaagaaggaatt
agacatgtggtaagggtaattcctactggagcaaccagcagttcaaacggctctcagagc
attaggtcactgcctagtgtaaatgagatggatttgatttcagtcgtcttatccggacat
ctggatccttttatcattgtatcacctcctgtgcttgtcacttcttcatgctccacagat
gagacagtggtggcagaatctgatgaagaagtggaaactgccacagccgttcacacctct
actgctgtctattcagtagaatcctctgagcatgacagcaaagagatgacagatctacat
atgatagaatccactcagcatgatagcggagaagaaactgcaatcaatgtaatagaatct
actgaaactgataggaagggaaatattactctggctagtgtaaatgccattgaacatgag
atcaaagaggagataccatgcaataatgtgtccattaaatggtctgaaggtgcttctttc
actggcttgaggaacagagatggtagaacaggatcgagattagaaaaagttgaagagtca
gaatgtgggaacgtggatgttatatacagccaagatcttatcgtaagagattctctatca
gcatcagttcattcttctacaaatgatgctgtcataaattttaaatgtttccgaaagagg
gagactccgtctggaaatagtttcagcagtctcattccattctcaaaggatccttacaaa
gaatcggactatggaaatgaggaagtagctgaatatctgaaagaagagaaaaagagaaaa
caaatggaagccttagcagaggacttatttaaatatgaggtggggagaagacggaatgca
gctggctctcgcactggactttttgcttatacttga
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