Coffea arabica (coffee): 113700511
Help
Entry
113700511 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113700511
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113700511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
113700511
NCBI-ProteinID:
XP_071915984
UniProt:
A0ABM4V8Y1
LinkDB
All DBs
Position
7e:11788595..11795140
Genome browser
AA seq
673 aa
AA seq
DB search
MSERRQLNNVVGWLGIFLQILLLTECAVTKKRFTVKDSKDLKKFPPVQLHRQKDHVVMDN
GLVKVTVSVPGGTVAGIEYNGIPNLLETRNKETNRGYWDVVWKFPGHSAFVEELEGTSFD
VITDEESGVELSFTITYDDSINSPQLPLNIDKRFILLRGHNGFYTYAIFERLEGWPALDV
SQTRAVFKLEEKLFQYMAISDKRQRIMPTLEDRERGETLAYPEAVLLTNPANHSLKVEVD
DKYQYSSDVKDTRVHGWICTNPPTGFWMIIPSNEFRIGGPMKQELTSQAGATTISSFHTN
HYAGEDMRQQFRDGEPWKKVYGPVFVYLNSVPESGDPDSLWEDAKQQMLQETENWPYDFP
RSEDYLSADQRGSVSGRLLVRDTGKNQDLKNGSLAYVGLALPGNAGSWQMENKGYQFWTQ
ADNNGNFSIENVLPGNQGLYAWVPGYIGDYRYDSCIIISPGTRITLDNVIYEPPRNGPTL
WEIGIPDRTAIEFFVPDPSPRFTNPLYLAYEKFRQYGLWDRYSEIYPDHDLVFTVGDSNY
ETDWFYAQVNRNIGNHTYVPTTWQIVFDLQNIDVSATYTLQIALASSTGAALQVRINDPN
ARIPIFNKGLIGKDNAIARHGIHGLYRLYSIEVWGSQLVQGRNSIFLTQSRNSFPWEGIM
YDYIRLEGPPQDN
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaggagacaactgaataatgtggttgggtggcttggaatatttcttcagata
ttgttgcttactgaatgtgcagtgacaaaaaaaagatttacagttaaagatagcaaagac
ctgaagaaatttcctccagttcaattgcataggcaaaaagatcacgttgtgatggataat
ggcctggtcaaggttacagtgtccgttcctgggggcacggttgcagggatagagtacaat
ggcattccaaatttactcgaaacaagaaataaagaaactaatagaggatattgggacgtt
gtttggaaattcccaggtcattctgctttcgttgaggagctggaaggtaccagctttgat
gtgattacggacgaagagagtggagtagagctttctttcacaataacatatgatgattcg
atcaatagcccacaactgccactaaatattgataaaaggttcatattgttacgtggccac
aatggattttacacatatgccatatttgaacgtttggaaggatggcctgctcttgatgta
tctcagacccgggcagtattcaaacttgaagagaaactctttcaatatatggctatatcc
gataaaaggcaaagaataatgccaacattagaagatagggaaagaggtgagactcttgct
tacccagaagccgttcttctcacaaatccagccaatcattctctcaaagtagaggtggat
gacaagtaccaatattctagtgatgttaaagatactcgggtgcacgggtggatatgtaca
aatccacccactggattttggatgataatcccaagtaatgaattcagaattggtggtcct
atgaaacaagaacttacatcccaggccggcgcaactactatatcgtcgttccataccaat
cattatgctggagaagacatgcgacaacaattcagagatggagagccctggaaaaaggtt
tacggccctgtttttgtctaccttaattctgttccagaaagtggtgaccccgactcactc
tgggaagatgccaagcaacagatgttacaagagactgagaactggccatacgatttcccc
cgttcagaagactatctttctgctgatcaacgtggcagtgttagtggccggttactagtt
cgagacactggcaaaaatcaggatctaaagaatgggagcttagcttatgttggcttagct
ctaccgggtaatgctggatcttggcaaatggaaaacaagggctatcaattctggacacaa
gcggacaataatggtaacttttcaattgaaaatgtcctaccagggaaccagggtttgtat
gcttgggtgcctggatatattggtgactacagatatgattcctgcatcatcatctctcca
ggaacaaggatcacacttgataatgttatatatgagcctccaagaaatggccctacatta
tgggaaattgggatccctgaccggactgcaattgagtttttcgtgcctgatccgagtcca
cggttcacaaatccattatatctggcttacgagaagtttaggcaatatggattatgggat
cgttactcggaaatatatcctgaccatgatttagttttcactgttggcgatagcaactac
gaaacagattggttttatgctcaagtaaataggaatattggaaatcatacctatgttcca
acaacatggcaaatagtgtttgatctccaaaatattgatgtatctgcaacctatacgctc
caaattgcactggcatcgtcaactggagctgcattgcaagttcgaattaacgacccaaat
gctaggatccccatttttaataagggtttgattggcaaggacaatgcaattgccagacac
ggtattcatgggctgtatcggctatatagcatagaagtttggggctctcaacttgtgcag
ggaagaaattcgatatttctcacgcagtcaagaaactcattcccttgggaagggataatg
tatgattacattcgtcttgaaggtccgcctcaagataactga
DBGET
integrated database retrieval system
