Coffea arabica (coffee): 113700803
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Entry
113700803 CDS
T11342
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113700803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113700803
03041 Spliceosome [BR:
carb03041
]
113700803
03032 DNA replication proteins [BR:
carb03032
]
113700803
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
113700803
Spliceosome [BR:
carb03041
]
Complex A
U1 snRNP components
Sm proteins
113700803
U2 snRNP components
113700803
Complex B
U1 snRNP components
113700803
U4/U6.U5 tri-snRNP components
113700803
Complex C
U2 snRNP components
113700803
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113700803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113700803
NCBI-ProteinID:
XP_027077045
UniProt:
A0A6P6TG84
LinkDB
All DBs
Position
7e:complement(29945531..29947609)
Genome browser
AA seq
155 aa
AA seq
DB search
MSRSLGIPVKLLHETTGHIMTAELKSGELYRGSMVECEDNWNCQLENITFTTKVSDARLR
FYNKLSVFCTHALEFTDGKVSQLEHVFIQGSKVRFMVIPDMLKNAPMFKRLEARIKGKGS
ALGIRRGRAVAMRARAQAAGRRAPPGRGIVPPVRR
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtagcttaggtataccggtaaagcttctacacgaaaccacaggacacatcatg
accgcagagctgaagagcggagagctctacagaggcagcatggttgaatgcgaagacaat
tggaattgccaactcgagaacatcactttcacaactaaggtgtcagatgcacgtcttaga
ttttacaacaaattaagtgtcttctgcacacatgctttagagttcacagatggcaaggta
tcacaacttgagcatgttttcattcaaggaagcaaagtcaggtttatggtgattccagat
atgcttaagaatgctccaatgttcaaacgtctagaagctagaatcaagggcaagggttca
gcacttggcattagacggggacgtgctgttgccatgagagccagggctcaggctgctggt
cgtagagctccaccagggaggggcattgtgccacctgtaaggaggtga
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integrated database retrieval system
