Coffea arabica (coffee): 113700950
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Entry
113700950 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113700950
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113700950
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
NOMO1-like_2nd
CarbopepD_reg_2
RhgB_N
Suppressor_APC
Motif
Other DBs
NCBI-GeneID:
113700950
NCBI-ProteinID:
XP_027077179
UniProt:
A0A6P6TF98
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Position
7e:11767852..11778766
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AA seq
673 aa
AA seq
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MGCGRQWSSKIWWLTVVANIMFFLNGNAKGTVMGTNLPSAPGVKLSVEDHQVVLQNGIVN
VTLSAPDGLVTKISYNGLDNLLEVGNEDDDRGYWDVVWTKSKTLDYLKGASYKVEVENEN
QVEISFTKKWDASLNGKVVPLNVDKRFVMLRGSAGFYTYAVLEHAPGMPDLDIPEARVVF
KLQHDKFHYMAVSDVKQRLMPQPVDRQTGQVLDFPEAVLLTKPVDPIFKGEVDDKYFYAG
DNFDNRVYGWVCSDPTIGFWMITPSNEFRNGGPFKQDLTTHVGPTVLNMFVSTHYAGDEL
ALQFASGETWKKVFGPVFVYLNSDVKAKENPSLLWQDAKQRMLKEVEAWPYTFPSSKDFF
KPNQRGTVGGQLQVLDKFTNKAPVPGINAYVGLAAPGAEGSWQRESKGYQFWTKTDAKGN
FVIKGIIPGKYSLYASVPGFIGDFKHSQDVTITPGSNVNLGNLVYKPPRNGPTLWEIGVP
DRTTGEFFVPEPEPTLKVHVFTTGDGESGTYDDKFRQYGLWKRYNDLYPTSDLVYTVGVS
NHTKDWFYAQVQRCKDKQTCIGTTWQIVFNLQNLITSGNYTLQLALASASFAELQVRFND
RNAAPLFTGGLIGRDNAVARHGTHGLYWLFSIGVPSNLLVKGKNTIFLTQARNSDQFRGF
MYDYIRFEAPAAP
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtgggaggcagtggagctctaaaatctggtggctgacggtggttgccaacata
atgttcttccttaatgggaacgcaaaggggacagttatgggaacaaatttgccttcagct
ccgggggtgaagttgtcggttgaggatcatcaagtggtattgcaaaatggcatcgtcaac
gttacattgtcagctccggacggcctggtcacaaaaatcagctataacgggctggataat
ttactagaagttggaaacgaagacgatgatcgagggtattgggatgtcgtttggaccaaa
agtaagacactggactacttgaaaggagcgagttataaggtggaagtggaaaatgagaat
caggtcgagatctcatttaccaaaaaatgggacgcttccctcaatggcaaggtcgttccc
ttgaatgtagacaaaaggttcgttatgctgcggggatcggcaggattttacacctatgcc
gtgcttgaacatgcacctggaatgcctgatctggacatcccagaagcaagagttgtattt
aagcttcagcatgacaagtttcactacatggctgtatccgatgtcaagcaaagattgatg
ccacagcctgtggaccgtcagacaggtcaggtgcttgattttcctgaagccgttctgtta
acaaaaccagttgatcccatattcaaaggagaggttgatgacaagtacttctatgcgggt
gacaactttgacaaccgagtttacgggtgggtatgcagtgacccaaccattgggttttgg
atgattacacctagtaacgagttccgtaatggcgggcccttcaagcaagatcttacaacc
catgttggtcccaccgtcctcaatatgtttgtaagtacccactacgcgggagatgagctc
gcgttgcaattcgcaagcggagagacctggaaaaaggtattcgggccggtttttgtgtat
cttaactcagacgttaaagccaaggaaaatccttccctactttggcaagatgcaaagcaa
cggatgttaaaagaagttgaagcatggccatacacatttccaagttccaaggatttcttt
aaacccaatcaaagaggaacagttggaggtcaattgcaagttcttgacaagttcacgaat
aaggcccctgtcccaggcataaacgcctatgtaggattagcagcaccaggagcagaagga
tcatggcaaagagaaagcaagggctatcagttttggaccaaaactgatgctaaagggaac
ttcgtaatcaagggaatcataccagggaaatatagcttgtatgcatcggtaccaggattt
ataggggatttcaaacatagccaagatgtcaccataaccccaggatccaacgttaatttg
ggtaatttggtctacaagcctccgagaaatggacctacactatgggagataggtgtgcca
gaccgcacaaccggtgaattctttgttcccgagccggaaccaactttaaaggtccacgta
tttacgaccggcgatggtgaaagcggaacatacgatgacaaatttagacagtacggattg
tggaagcgttacaatgacttgtaccctacaagtgatttggtgtacaccgtcggagtcagc
aatcatacgaaagattggttctatgctcaagttcaaaggtgcaaggacaaacagacttgc
atcggaaccacctggcaaattgtgtttaacctccaaaatttgattacctctggaaattac
actctccaattagcactggcatccgcaagttttgccgagcttcaagtccgattcaacgac
agaaatgcagctcctctctttacgggaggtctaattgggagggataatgccgtggccaga
catgggactcatggcctgtattggctctttagcattggtgtacctagcaatttgcttgtc
aaagggaaaaacacaatatttctaacgcaagcaagaaactccgaccagtttagaggattc
atgtacgactacatccgatttgaagctcccgcagccccatga
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