Coffea arabica (coffee): 113700984
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Entry
113700984 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113700984
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113700984
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113700984
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CRD
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4_4
zf-CCHH
DUF8106
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-GeneID:
113700984
NCBI-ProteinID:
XP_027077212
UniProt:
A0A6P6TGP6
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All DBs
Position
7e:25476424..25493216
Genome browser
AA seq
471 aa
AA seq
DB search
MERGECSTPVSNPSDNGDDIWAKLVPSNSQCSDIGLTSSETLICSEINISSSAKSEWCKI
IRNMDLASATIQNKSENEIIVDEMVVSGEETAVIRCGSEIIPCSDSEGKGLLSYRFKVMP
TSEPFKRDLKIFLDPEHAKCCICLNVWHDVVTVAPCLHNFCNGCFSEWLRRSQKKHSNVL
CPQCRAVVQFVGRNHFLHSIEEDVLKADDSLKRSVEEIAVLDSYASIKSPLVLNAGKKNR
RKRLRSPPEDFPREAESDLELPCPQCGTEFAGFRCNQSTVHLQCHSCGGMMPSRTSAVPQ
HCLGCDRAFCGAYWNAQGVTSSDSHPMCSSETFKPIIERTTTRLPFWVHEKNRHEQDITE
SCIRQMGRSLQDVISEWLTKMNNREIDRTRMPLNHAEMITAQAHTCVDCYDKLVSFLLYW
FRITMPKHFLSPEASQREDCWYGYACRTQHHNEEHARKRNHVCRPTRGSHR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaggagaatgttctactcctgtgtccaacccctccgacaatggtgatgatatc
tgggccaaacttgtaccttcaaattcgcagtgctcggacattggattgacgtcaagtgag
acactaatatgctctgagatcaacatctcatcgtctgcaaagtctgagtggtgtaaaatt
ataagaaatatggatctggcttctgccacaatacagaacaagagtgaaaacgaaatcatt
gtggatgagatggttgtttctggtgaagaaactgcggttatcagatgtggcagtgagatt
atcccctgttctgatagtgaaggaaaagggcttttgagttatagatttaaagtaatgcct
acctccgaaccattcaagagagacctgaagattttcctggatcctgagcatgcaaagtgc
tgcatttgtcttaatgtttggcatgatgttgtgacagttgcgccctgccttcacaacttc
tgcaatggatgtttctcagagtggctaagaaggtcccaaaagaaacattcaaatgtttta
tgtcctcaatgtagagcagttgtacaatttgtcggaaggaatcattttctacacagtatt
gaggaggatgtattaaaagcagatgattcgctgaagcggtcagttgaagaaattgctgtc
ttagattcatatgcatcaattaagtcccctctggtcttgaacgctgggaaaaaaaatcgt
cggaagagactgcgttctccaccagaagattttcctcgagaagctgaaagcgatttggag
cttccatgccctcagtgtggcactgaatttgctgggtttcggtgcaaccaaagcacagtt
caccttcaatgtcattcatgtggtggaatgatgccttccagaacgagtgctgtcccacaa
cactgtttgggatgtgatagagcattttgtggtgcttactggaatgctcagggtgttact
agcagtgattctcatccaatgtgcagttctgagactttcaaaccaatcattgaacgtaca
accactagattgccattttgggtacatgagaaaaaccggcatgagcaagatataacggag
agttgtatcaggcagatgggaagatcattacaggacgtgatctctgagtggctgacaaag
atgaacaaccgagaaatagatcgaacaaggatgccgctaaatcatgctgagatgattact
gctcaggcgcatacttgcgttgattgctatgacaaattagtctcattcctgctgtactgg
tttcggatcacaatgccaaaacattttctatccccagaagcttctcaaagggaggactgc
tggtacggctatgcatgtaggacgcagcatcacaatgaagagcacgctcgcaagagaaat
catgtctgccgtccaacaaggggcagtcacagatga
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