Coffea arabica (coffee): 113700990
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Entry
113700990 CDS
T11342
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
carb01002
]
113700990
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113700990
04121 Ubiquitin system [BR:
carb04121
]
113700990
Enzymes [BR:
carb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113700990
Peptidases and inhibitors [BR:
carb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113700990
Membrane trafficking [BR:
carb04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
113700990
Ubiquitin system [BR:
carb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113700990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
113700990
NCBI-ProteinID:
XP_027077221
UniProt:
A0A6P6THY2
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All DBs
Position
7e:complement(15009026..15014824)
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AA seq
590 aa
AA seq
DB search
MKIQGRIDIQSLVEKLKFGAKFLPQVNWSSPTGLHISVAASLLGATGLILAVKDGKVGSF
VNFGLPWSSSDGLVSSDKNWVVPGLQNLGNNCFLNVVLQALASCSSFQRFLDIVFEDYKF
PSVEESAKALPLTAAVTSLLEELCMVQYVRSVRSPRKVMVAMENYMPSFSLTSQQDAEEA
FFHLLSSLREELSESYVHRPSSLADATVLDNSRILAPRKRLRESEQQRWRRSFLGPFDGI
LGSILTCQSCSFQISLDFQLFHSLHLSPVLSSGGTIMTGCSLESCLSQFFVSERLDNYFC
SHCWHNAAIKYLSLTRENKTDIEKLILCSQDDSCDCKSLCSLRLLPWSNSYSRSFKQLSI
ARSPQILCVHLQRASVNLFGELVKIQGHISFPLILDLSPFMKRGLVIKSLEENLQRGQVL
SKCQPPFPCPMQPTMENATGLINCNGETANKFPLEAENPDHEQTVYDPPKNVHGIKTWPK
MPGNGSSVDFMMNFRPIHSNDKVDGPSTSTSSKDHTYRLVSVVQHFGKVGSGHYTVYRRV
KAETCDEDPIALLEPTHARWFCISDSEVHGVSEKDVLEAEASLLFYEKIH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcaaggaagaatagatattcagtcccttgtagaaaaattgaaatttggagcc
aaatttttgccccaagtgaactggagttcaccaaccgggcttcacatatcagtggctgca
agccttttgggtgctactggcttgatcttggctgtcaaagatggtaaagttggaagcttt
gtcaactttggtctaccatggtcatcatctgatggacttgttagttctgacaaaaattgg
gttgtgcccggattgcaaaaccttggaaacaattgtttcttgaatgttgttttgcaggct
ttggctagttgttcgagttttcaaagattcctcgatatcgtctttgaggactataagttt
ccatcagtagaagagagtgctaaagcattgcctcttactgctgccgtgacatccctgctg
gaagaactatgtatggttcaatatgtgagatctgtacgaagtccacgaaaggtgatggtt
gctatggagaattacatgccaagtttcagcttaactagccagcaggatgcagaggaagca
ttctttcatcttctctcttctttgagggaagaattgtcagaatcttatgttcacaggccc
agctccttggctgatgcaactgtactcgataattccagaattcttgctccaagaaagagg
ctaagggaatctgaacagcaaagatggcggcgtagtttccttggaccttttgatgggatc
cttggtagcatcttgacctgtcagagttgttcgtttcagatctctctggatttccaatta
tttcatagcttacacctctcgccggtgctcagtagtggtggtacaattatgaccggatgc
tccttggagagttgcctgagccagttctttgtttctgaacgacttgataattacttctgc
agtcactgctggcataatgctgctattaagtacctatccttgacacgtgaaaataagaca
gatattgaaaagctgatactctgtagtcaggatgattcatgtgactgtaaaagtctctgt
tctcttagactattaccctggtcgaacagctactcaagaagcttcaagcagctgagtata
gcacgtagcccacagattctgtgtgttcacctgcaacgtgcttctgtgaatctttttgga
gaactagtcaaaattcagggtcacatctcatttccattgattttggacctctcacctttt
atgaagaggggattagtaataaagagcttggaagaaaatttgcaaagagggcaagtactg
tccaaatgtcagccacccttcccttgtccaatgcaaccaaccatggaaaatgctacaggt
ctgataaattgcaatggggagacagcaaataaatttcctttggaagcagagaatccagat
cacgaacaaactgtatatgacccgccaaaaaatgttcatgggatcaaaacttggccaaaa
atgcctgggaatggaagctctgtggacttcatgatgaactttaggcctattcattctaat
gacaaggtagatggaccttccacttctacatcttccaaagatcatacctacaggctagtt
tcagtcgtccagcactttggaaaagttggaagcggtcattacactgtttacagaagagtc
aaagctgagacttgtgatgaagatccaattgcgctcttagaaccgactcatgcacgatgg
ttttgcatctcggattctgaagtgcatggtgtctcagagaaggatgttctggaagcagag
gctagtttgttgttctatgagaaaatccactga
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