Coffea arabica (coffee): 113701217
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Entry
113701217 CDS
T11342
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00900
Terpenoid backbone biosynthesis
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
Module
carb_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
113701217
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
carb01006
]
113701217
Enzymes [BR:
carb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
113701217
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
113701217
2.5.1.29 geranylgeranyl diphosphate synthase
113701217
Prenyltransferases [BR:
carb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
113701217
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
MiaE
DUF3102
Motif
Other DBs
NCBI-GeneID:
113701217
NCBI-ProteinID:
XP_027077557
UniProt:
A0A6P6T5Y3
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Position
7e:11739028..11740492
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AA seq
416 aa
AA seq
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MGSDFEATRQVTVSRGDWKHLLYKLVQYSAQTAYQLCKVGSISLSLARMAISATISSRYG
GSFLQQNLDHFKISVQTIPRSQNIRMIVPKKINPASHVANSSALEATQVQEKKPLSLDSP
FPDFRFDEYMNTKAISVNKALDDAIPLQEPIKIHEAMRYSLLAGGKRVRPMLCIASCELV
GGDESLAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAVLAGDALLS
LAFEHVAAKTGNVQASRVVRAIAELASSVGSQGLVAGQIVDLSSEGEQVDLNHLEYIHVH
KTSKLLEAAVVCGAIMGGANEAEIERMRKYAKCIGLLFQVVDDILDVTKSSEELGKTAGK
DLATDKATYPKLMGLERAKKFADELVAMATEELSHFDAVKAAPLYHLANYIAYRQN
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagatttcgaagcaacaagacaagtaacagtatctcgaggagattggaagcat
ttgctatataagttggtgcaatattctgcacaaacagcatatcaattgtgcaaagttggc
agtatttccctgagcctagcaagaatggcaatctctgcaaccatctccagccgctatgga
ggttcattccttcaacaaaaccttgatcatttcaaaatatctgtccaaacaatcccacgt
agccaaaacattagaatgattgttcctaagaaaattaatcctgcatcccatgttgcaaac
tcttctgctcttgaagccacgcaagttcaagaaaagaagcctttgtctctggactcgcct
tttccggacttccgatttgacgaatacatgaatacaaaggctatatcggtgaataaagca
cttgatgatgctatcccattgcaggagccaatcaagattcacgaagcaatgagatattcc
ctccttgccggcggcaaaagagtgaggccgatgttgtgcatcgcctcgtgtgagttagta
ggaggagatgagtcgttggccatgccaatggcctgcgctcttgaaatgattcacaccatg
tccctcatccatgacgatcttccctgcatggataacgacgatttacggcgtggaaagccc
actaatcataaggtctatggtgaagaaactgcagttctcgctggtgatgcgcttttgtcg
cttgcttttgaacacgtagcagcaaaaactggcaacgttcaagcaagtagagtggttaga
gccatcgctgagttagcttcatctgtgggttctcaagggctcgttgcagggcagattgtg
gacttgagcagtgaaggggaacaagtggatttgaatcatttggagtatattcatgttcac
aaaacatcaaagcttttggaggctgcagtagtttgcggagcaattatgggaggagcaaat
gaagcagagatcgagagaatgaggaaatatgcaaagtgcatcggactgctgtttcaggtg
gtggatgacattcttgatgtaacaaaatcgtcggaggaattggggaaaactgcaggtaaa
gatttggctactgacaaagctacttatcccaagctaatggggctcgagagggcaaagaag
tttgccgatgagttggtggctatggccactgaagagctcagccactttgatgctgtcaag
gctgcgccgttgtatcatctggcaaactacattgcttatcggcagaattga
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