Coffea arabica (coffee): 113701738
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Entry
113701738 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113701738
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113701738
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
DUF4250
CTK3
DUF6447
Motif
Other DBs
NCBI-GeneID:
113701738
NCBI-ProteinID:
XP_027078304
UniProt:
A0A6P6TJR5
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Position
7e:34297104..34312677
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AA seq
568 aa
AA seq
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MSDDDFNGQTLAEKLAKLNSSQQSIESLSRWCITHRKKAKQIVETWEKIFKSAPREQHVS
FLYLANDILQNSRRKGSEFVNEFWKFLPAALKHVYEGGDENGKKAASRLVDIWEERKVFG
SRGQSLKDEILGKNPTPTTASNGKSSNPIRVVKRDAQSLRIKLAVGGLPERIISAFHLVH
EESVNEEAAFSKSKSAVSWFKELGKDIESSSHAGSLQGSELVEKMQEHENALRHCVTQLE
NFETTRLALVSQLNEALRDQESKLELIRNELEVARSQIEQTLCVKQKLVSSSYLASQSNA
GSQLMEAARVAEANLPLTQLSSMPILPPTPPITFTSSKLNEEENKKAAAAAVVAKLAAST
SSAQMLTSVLSSLVAEEVASMSNGLTSTGFSSSLPFGSPEKRPKLENPVRFSEVNHSDGS
HAAFFASAQQTVSNMPVGAANGMQLMSQGNQLQATFPQPPPPPPPPPQSVTPGNSSATQL
GQSAAMMIGVPYGYGSSNLPPPPLPPHMPMGFARPAPLPTQQPPPQQLQNQQSQQQQQQA
AAGGYYRPPGIGFYAQGHQSATPPVPRQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgatgactttaatgggcagactttggctgagaagttggctaaacttaacagt
tcacagcaaagcattgagtcattgtctcgttggtgcattactcaccggaagaaagctaaa
caaattgttgaaacatgggaaaaaattttcaaatctgcacctcgggagcagcatgtttca
tttctatatttggccaatgatattctgcaaaatagtaggcgcaagggcagtgagtttgta
aatgaattttggaagttccttcctgcagctctcaaacacgtctatgagggtggtgatgaa
aatggaaagaaagcagcctccaggctggttgacatttgggaagaaagaaaagtttttgga
tctagaggtcagagtcttaaagatgaaatactgggaaagaatcctactcccacaactgcc
agcaatggaaagagctcaaaccctatcagagtcgtgaagagagatgctcaatcattaaga
attaaactggctgttgggggtttgccagaaaggataatatccgcattccatttggtccat
gaagaaagtgtcaatgaagaagctgcttttagcaagtccaaaagtgctgtttcctggttt
aaagaacttggaaaagacattgaaagctcttcacatgcgggaagcctgcaaggttcagag
ttggtagaaaagatgcaagaacacgagaatgcccttaggcattgtgttactcaactagaa
aattttgaaactactaggcttgcattggtttcacagcttaatgaagcacttcgagatcaa
gaatcaaagctggagctgatacgcaatgaattggaggtggcccgcagtcagatagagcaa
actttatgtgtaaagcagaagctggtatcatcatcttatctggcttcccaatctaatgct
ggtagccaacttatggaggctgcaagggttgctgaagcaaacttgcctttgacccagtta
tcaagcatgcctatccttccgccaacccctcctataacttttacttcttcaaaactcaat
gaagaggagaataagaaggcagcagcagctgctgtcgtggcaaaacttgctgcttccaca
tcctctgcacagatgcttacttctgttctttcatcccttgttgcagaagaggttgcctct
atgagtaatggtttaacttcaactggattctcttctagtttaccttttggatccccagag
aaaaggccaaagttagagaaccctgtgcgtttttctgaggtgaatcattctgatggcagt
catgctgcattctttgcttctgcacagcagacagtaagtaacatgccggttggtgcagcc
aatgggatgcagcttatgtcccagggaaaccaacttcaggcaacattcccacaaccccca
ccgccgccgccgccaccgccccaatctgtaactcctggaaattcttctgcaactcagtta
ggccaatctgctgcaatgatgataggggttccctatggatatggttcaagcaaccttcca
cctccacctttacctccacatatgccaatgggatttgctaggccagctcctttaccaact
cagcaaccacctcctcagcagcttcagaaccagcagtctcagcagcagcagcagcaggca
gctgctggtggatattatcggcctccaggtattggattctatgcccaaggtcatcagtca
gcaactccacctgtaccccggcagtga
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