KEGG   Coffea arabica (coffee): 113701848
Entry
113701848         CDS       T11342                                 
Name
(RefSeq) uncharacterized protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113701848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:carb03019]
    113701848
   03041 Spliceosome [BR:carb03041]
    113701848
Messenger RNA biogenesis [BR:carb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     113701848
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     113701848
Spliceosome [BR:carb03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    113701848
SSDB
Motif
Pfam: RRM_1 RRM_7 Mit_ribos_Mrp51 RRM_MARF1 RRM_5 RRM_RdRP1_2
Other DBs
NCBI-GeneID: 113701848
NCBI-ProteinID: XP_027078500
UniProt: A0A6P6TKD0
LinkDB
Position
7e:complement(4180164..4183300)
AA seq 283 aa
MAFVNRISNVLKLRVSRHMNLELSASNSSLYQTIRSMSSSKLFVGGLSYNTDETSLKEAF
SQHGEVVEARIIMDRDHGNSRGFGFVTYASSEEASAAIQAFDGQDLHGRRIRVNYANDRP
RAPRFDGGYGYGGGGGFNYGRGNGGYGGPGGYASGGYGGGGPRGGYDSGNYGNSNQYASG
DGRMDGFSGSNYGSRVGDGNAGNFGASGDSHYLSSDSSNQGGFANSGFDGNASPYGQAQE
QLSGNQGEADALDEDFGQDTLNANYKDNDDDEDDSNDYVNTRG
NT seq 852 nt   +upstreamnt  +downstreamnt
atggcttttgtcaatagaattagcaatgtgcttaaactgagagtgagcaggcatatgaat
ttggaattatctgcttccaactcgtcactttaccagactataagaagcatgtcatcttca
aagctctttgttggagggctttcttacaacactgatgagacgagtttgaaggaagccttc
tctcagcatggcgaagttgttgaagctagaattatcatggatcgtgaccatggaaactca
agaggttttggctttgtaacttatgcctctagtgaggaggcttcagcagctattcaggca
tttgacggccaggatcttcatggccgacggataagggtgaattatgcaaatgacaggcct
cgggctccaagatttgatggtggctatggttatggtggcggtggcggctttaactatggt
cgtggaaatggtggttatggaggccctggaggatatgcaagtggcggttatggaggtggt
ggcccaagaggtggatatgatagtggaaactatggaaatagcaatcaatatgctagtggg
gatggcaggatggatgggttcagtggcagcaattacggaagtagagttggtgatgggaac
gctggcaattttggtgctagtggagatagccactacttgagcagtgattcatctaatcaa
ggtggatttgcaaactctggttttgatggaaatgcctcgccatatggacaagctcaggaa
cagttgagtggcaatcaaggggaagcagatgctcttgacgaagattttggccaagacaca
ctgaacgcaaactacaaggataatgatgatgatgaagatgattccaatgattacgtcaac
acaaggggctga

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