KEGG   Coffea arabica (coffee): 113701891
Entry
113701891         CDS       T11342                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
carb  Coffea arabica (coffee)
Pathway
carb03082  ATP-dependent chromatin remodeling
carb03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    113701891
   03083 Polycomb repressive complex
    113701891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:carb03036]
    113701891
Enzymes [BR:carb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     113701891
Chromosome and associated proteins [BR:carb03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     113701891
   HDAC complexes
    Sin3A-HDAC complex
     113701891
    BRAF-HDAC complex
     113701891
    REST complex
     113701891
    SHIP complex
     113701891
    MiDAC complex
     113701891
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     113701891
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    113701891
  Chromatin remodeling factors
   NuRD complex
    113701891
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 113701891
NCBI-ProteinID: XP_027078577
UniProt: A0A6P6TKL2
LinkDB
Position
7e:complement(18109769..18118067)
AA seq 500 aa
METGGNSLPSGPDGVKRKVSYFYDPEIGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMH
VLKPNPAREKDLCRFHADDYVSFLRCITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDLRDLGFGKGKYYSLNVPLDDGI
DDDSYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGMELEDKMPQHEYFEYFGPDYTLHVAPSNMEN
KNSRQILEDIRAKLLDNLSKLQHAPGVQFHERPPDTELPEADEDQDEEDGKWDPDSDVNM
DGDDRVPLSSGVKREYVEPESKETDDMDEDERPREADPMLTESAGLKEPNSVLAAVDEPN
VKLEPGNSSKPFDQPVDKNP
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggaaactggaggtaattccttaccgtctggaccagatggggtgaaaaggaaagtcagt
tacttctatgacccggagattgggaactactattatgggcaaggtcatccaatgaaacct
cacagaattcggatgacacatgctcttcttgcacattatgggttgctgcagcatatgcat
gttttaaagcccaatcctgccagggaaaaggatctctgcaggtttcatgcagatgattat
gtttctttcttgcgttgtataactcctgaaactcagcaagatcagttgaggcagcttaaa
agatttaatgttggtgaagattgtcctgtttttgatggtctgtactcgttctgtcaaaca
tatgctggaggctctgtgggtggggctgtgaagttgaaccatggacattgtgatattgct
gtaaattgggctggtgggttgcatcatgctaagaaatgtgaggcttcgggtttctgctat
gtgaatgatatagtgcttgcaatattggaacttcttaaagtgcatgagcgtgttttgtat
gttgacattgatattcatcacggggatggtgttgaagaggcattttatactacagacagg
gtcatgactgtttcatttcataaatttggagattactttcctggtaccggggatttacga
gaccttggatttggaaaggggaagtattactctcttaatgttccactagatgatggaatt
gatgatgacagctatcaatctttgttcaagccaataatgggcaaagtgatggaggttttt
aggcctggtgcagtggtcttgcaatgtggtgctgactccttgtctggagacaggttgggt
tgctttaacttgtcaattaagggtcatgcagaatgtgtaagatacatgagatcatttaat
gtcccactgctgttgctcggtggaggtggctacacaatacgtaatgttgctcgttgctgg
tgttacgagactggtgtcgcacttgggatggaacttgaagacaagatgccacagcatgaa
tattttgaatattttggtccagactatactcttcatgttgccccaagtaacatggaaaat
aaaaattctcgtcagattttagaagacatccgagcaaagcttcttgataatctctcgaaa
cttcagcatgcacccggcgtgcaattccacgagcgacccccggatactgaacttcctgag
gcggatgaagatcaagatgaggaagatggaaaatgggatcctgattctgatgtaaacatg
gatggagatgatcgtgttcctttgtctagtggagtgaagagggaatatgttgagcctgaa
tcaaaggaaacggatgatatggatgaagatgagcggccaagagaagcagacccaatgctt
acagagtcagctggtttaaaggaaccaaattcagtattggctgctgtagatgaaccaaat
gttaaattggaacctggaaattcaagtaagccatttgatcagcctgttgacaagaatcct
tga

DBGET integrated database retrieval system