Coffea arabica (coffee): 113702185
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Entry
113702185 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K13091
RNA-binding protein 23/39
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113702185
Spliceosome [BR:
carb03041
]
Common components
Common spliceosomal components
General mRNP proteins
113702185
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
113702185
NCBI-ProteinID:
XP_027079050
UniProt:
A0A6P6TLX1
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Position
7e:15105977..15114633
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AA seq
597 aa
AA seq
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MDFDEYDYLEKTVEETNGPPSKTKETKDSAEKERDKEKGYRRKERGDEDEGDIDEDERDR
KNSSSKRSRGDDENGRDRDRERERDRDREKERSSLHRSRDRESERSSRDRDRDKEKREKE
RDRDRERDRERRDRDKEKERERDRDRDKEKEKDRERRDREKEKERDREMERSKEMERSRR
SRSRSRLDRERERELIRERERELEMRESRRFKEKKEAVEPEADPERDQRTVFAYQMPLKA
TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFFDSMSVPMAIALSGHLLHGQPVM
VKPSEAEKNLVPSNASSNSSVVGPYGATDRKLYVGNLHFNMTEFQLKQIFEAFGPVELVQ
LPTDPETGHCKGFGFVQFAQLEHAKAAQVLNGKLEIAGRTIKVSSVTDHVGVQDSGQKTA
DFDDDDGGGLALNAQSRAMLMAKLDRSGIASSVAGSLGVPALNGATPAQQSITMPMVAPT
AMSAPVLPAQVLMPPEPIGNPSECLLLKNMFDPATETDPEFDLDIRDDVREECSKYGPVK
HILVDKNSSGYVYLRFENVEAAARAQQAMHKRWFARRLISAIFLQPYEYDAKFKGAA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgattatttggagaaaaccgtggaagaaaccaacggtcctccg
tccaaaacgaaggagactaaggactccgccgagaaagagagagacaaggagaaaggatat
cggagaaaagagcgtggcgacgaggacgaaggtgatattgacgaggacgaaagagatcgg
aaaaattcctccagcaaaaggtcccggggagatgacgaaaacggccgagatagagaccgc
gagagggaacgagatagggatagggagaaggagaggagctcgctgcaccggagtcgagat
agggagagtgagaggagttcgagggacagggatagagacaaggagaagagggagaaagag
agagatagggatagggaaagagatagggagaggagagacagagacaaggagaaggagagg
gagagggatagggacagggacaaggagaaggagaaggacagggagaggagggatagggaa
aaggagaaggaaagagatagggaaatggagaggtcgaaggaaatggagaggtcaaggagg
agccgaagcaggtccaggctcgatcgtgaaagggagagagagttgatcagggaacgagag
cgcgagctcgagatgagggaaagcaggagatttaaagaaaagaaagaagcggtggaacct
gaggctgacccagaaagggatcagagaacagtatttgcttaccagatgcccttgaaggca
actgagagggatgtttacgagtttttctcaaaagcaggaaaggtgagggatgtacgtctt
atcatggatcgaaattcgaggagatcaaaaggagttgggtacattgagttctttgattcc
atgtctgtgccgatggcaattgctctatctgggcatctacttcatggacagcctgttatg
gttaaaccatcagaggcagaaaagaaccttgttccatcaaatgcttccagtaattcaagc
gttgtgggcccgtatggtgcaacagataggaaactctatgttggaaatttacatttcaac
atgactgaatttcagcttaaacagatttttgaagcatttgggcccgttgaacttgtacag
ctgcctactgatcctgagactggacactgcaaaggttttggctttgttcaatttgctcaa
ctagaacatgcaaaggctgcgcaagttctaaatgggaaattggagattgctggtcgaact
attaaggtttcatctgttacggatcatgttggagtgcaagattcagggcagaaaactgcc
gattttgatgatgatgatgggggtggattggctttgaatgctcaatcaagagcaatgcta
atggcaaaactggatcgcagtgggattgcgtcaagtgttgctggttcccttggagtacct
gcgcttaatggcgcaactcctgcacaacaatccataaccatgcccatggttgcacctaca
gcaatgtctgctccggtacttccagcacaagttttaatgcccccagagcccattggcaac
ccaagcgagtgtttacttttgaagaatatgtttgatcctgcaactgagacggatccagaa
tttgatttggacatcagggatgatgtgcgtgaagaatgttcaaagtatggcccggtgaag
catatccttgtggacaagaatagttctggttatgtttatttgcgctttgagaatgtggag
gctgcagcacgtgctcaacaagccatgcacaagcgatggtttgctcgccgattgatttca
gcaatcttcttgcaaccatatgaatatgatgcaaaatttaaaggggctgcttga
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