Coffea arabica (coffee): 113702436
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Entry
113702436 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113702436
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113702436
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
Lipoprotein_16
Motif
Other DBs
NCBI-GeneID:
113702436
NCBI-ProteinID:
XP_027079451
UniProt:
A0A6P6TED1
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Position
7e:11812731..11818368
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AA seq
671 aa
AA seq
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MEKANWKRHSHLALFLWFLVSSRSVYARASRLRNVKELKSSPPLNLDVQQGYVVMDNGLV
RVTLSNPAGIVTEIKYEGVDNALDYSQRESRRGYWDIVWQRPGQADIFTIIEGTSFKVMA
QNENQIEVSFKMIYDAAHDQSGSALPLNIDKRFVMLRGQPGFYSYAIFERSNGWPGVDIS
ELRIALKLDHRRFNYMAVADNIQRVMPTASDRTNGQPLAYPEAVFLTNPTNLTFKGQVDD
KYEYSKDNKDNHVHGWITSDSQVGFWMIIPSYEFKTGGPIKRELTSHVGPTTLAAFHSRH
YAGATLKGLKFVDGEPWKKVFGPVFVYLNSNSDSPTSFSLWEDAKHQSVKEARKWPYDFP
ASDDYPHATQRATVRGHLKVHDRYLERSPFPAKSAYVGLAPPGAPGSWQLNAKGYQFWTQ
TDDCGHFTIRGIRPGKYNLYAWVPGIMGDYKSDLDINLRPGEYKLGEFVFTPPRNDPTIW
EIGIPDRTAAEFYVPDGNPQLENPLFINHPEKYRQYGLWERYTDLYPDHDLVFRVGVSDY
RKDWFFAHVTRRSEDNSRLPTTWQISFDLRQVLPKAIYTLQLALASSAGAEVQVRVNDPN
ASSPQFSTGLIGKDNAIARHGIHGLYQLFSVNIPGNRLVSGTNTIFLRQSRGGYIFSGVM
YDYLRLEGPAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcaaactggaagagacactcccatttagcgttattcttgtggtttttagtt
agttcgcggtccgtctatgctagagcgagtcgattgagaaatgttaaagagctgaaatcc
tctcctccactcaacctggatgtacagcagggctatgtggtgatggacaatggcctcgtt
agagtcactttatccaatcctgctggtattgtcacagaaataaaatatgaaggagtcgat
aatgctctggactatagtcaacgagagtcacgaagagggtactgggatatcgtgtggcaa
aggccaggccaagctgatattttcactattatcgaaggaacaagcttcaaagttatggcc
caaaatgagaatcaaattgaggtttccttcaagatgatttatgatgctgcccatgatcaa
agtggttcagctctacccctaaacattgacaaaaggtttgtaatgctgcgtggccaacct
ggattctactcttatgccatatttgaacgctcgaatggatggccgggagttgatatcagt
gaattaaggattgcactcaagcttgaccacagacggttcaactacatggccgtagcggac
aatatacaaagggtcatgccaacggccagtgatagaacaaatggtcaacctcttgcctat
cctgaagctgtttttttgacaaatccgaccaatttaactttcaagggacaggtagatgat
aagtatgaatactcaaaagacaacaaggacaatcatgtacatggctggataacctctgat
tcccaagtgggattttggatgataatccccagttatgagttcaaaactggtggccctata
aaacgagaactaacatcccatgttggaccgaccaccttagcggcatttcactcccggcat
tatgctggtgccaccttgaaaggactaaagtttgtcgatggagagccgtggaaaaaggtt
tttggacctgtttttgtatatctgaattccaattcagacagccctacatcattctctctt
tgggaagacgcaaaacatcagtcagtaaaagaagcacggaaatggccatacgatttccca
gcatcagacgattatcctcatgccactcaaagggccacggttaggggtcatctaaaggtc
cacgatagatacttggaacgatcgccttttcctgccaaatctgcatatgtgggattagct
ccgccaggagctccggggtcatggcaactaaatgccaagggttatcaattttggactcaa
actgatgattgtggtcatttcaccataagaggcattcggccgggcaaatacaacttgtat
gcttgggtacccggaattatgggcgattataagtctgatttagatattaacctcaggcca
ggagagtacaaactaggagaattcgtgtttacgcctcctagaaatgatccaacaatttgg
gaaattggcattcctgaccgtacagctgctgagttctatgtgcctgatggaaatccacaa
ctcgaaaatcctttattcatcaaccatcctgaaaagtatcggcaatatggtttgtgggaa
cgttatacagacttataccctgatcatgacctagttttcagagttggagttagcgattat
cgaaaggactggttctttgctcatgtaacaaggagaagcgaagataattcacgtctacct
acaacttggcaaatttcattcgacctcagacaggtccttccaaaggcaatctacaccctc
caattggctctggcatcttccgcgggtgctgaagtgcaggttagggtcaacgatccaaat
gcaagttctcctcaattttctacagggctaattgggaaggataatgcaattgcaagacat
ggaattcatgggttgtatcagctctttagtgttaatataccaggcaacaggcttgtatca
ggaacgaacacaatcttcctgaggcagtcaaggggtggatatatattcagcggggtcatg
tatgattaccttcgtctggaaggaccagcagtgtaa
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