Coffea arabica (coffee): 113702944
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Entry
113702944 CDS
T11342
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carb03400
]
113702944
Enzymes [BR:
carb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
113702944
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
113702944
Prokaryotic type
113702944
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
113702944
NCBI-ProteinID:
XP_027079929
UniProt:
A0A6P6TN54
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Position
8c:complement(43231488..43235397)
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AA seq
484 aa
AA seq
DB search
MANSMASIQQGRIRVLKQASGPSIDREKLKGPVVYWMFRDQRLRDNWALIHAVDQANKAN
VPVAIAFNLFDSFLGAKARHLGFMLRGLQKLHQNLQGMSLNIPFFLFQGEALDTIPNFLK
ECGASLLVTDFSPLREVKNWKETITERLEDSVSVHEVDAHNVVPIWVASDKLEYSAKTIR
GKINKLLPEYLIDFPTLGPSKRKWPNLHHFIDWDKLIADVVRKGAEVPEIAWCEPGEDAA
MEVLMGSKNGFLTARLKNYSMDRNNPLKPKALSGLSPYLHFGQIAAQRCALEARKVRTLS
PQGVDTFLEELIVRRELADNFCFYQPHYDSLQGAWEWARKTLMDHASDKREHTYTMQQLE
KAQTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTSGPTEALAIAITLNDKYEIDGR
DPNGYVGCMWSICGVHDQGWRERPVFGKIRYMNYAGCKRKFDVDGYIAYVKRLAGESKKR
KAEI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccaattcaatggcatcaattcagcagggtcgaatccgagttctgaaacaggcatca
gggccatccattgaccgggagaaacttaagggtccagttgtctactggatgttcagagat
caacggctgcgagataactgggctttgatccacgcagttgatcaagcaaataaggccaac
gtacccgttgccatagctttcaatctatttgattccttcttgggtgccaaagccagacat
ctgggttttatgcttagaggccttcaaaagcttcatcaaaatcttcaaggaatgtctctc
aatatccccttttttctgtttcagggggaagcactggacacaattcccaattttttgaaa
gaatgcggggcttcacttttggtgacagacttttcacccttaagggaggtcaagaattgg
aaagaaacaattactgagaggttggaagattcagtatcagttcatgaagttgacgcacac
aatgtagtgcctatttgggtggcatctgataaattggaatatagtgctaagaccataagg
ggtaaaatcaataaattgcttcctgagtacctaattgattttccaacactagggccttca
aaaagaaagtggcctaatctgcatcattttatagactgggataaactaattgcagatgtt
gtaaggaaaggagcagaagttcctgaaattgcatggtgtgaaccaggtgaggatgctgct
atggaagtattgatggggagtaaaaatgggttcttgactgccagattgaagaattattcc
atggatcggaataatccgctaaagcccaaagcactctctggtctctccccttatctgcat
tttgggcagatagcagcacagcggtgtgccttagaggcacgcaaagttcggacactatct
ccacagggagttgacacattcttagaggagttgattgtacgcagagaactagctgataac
ttctgcttctatcagccccattatgattcactgcagggggcatgggaatgggcacgcaag
accttgatggatcatgcttctgataaacgtgaacatacatacacgatgcaacaattggag
aaggcacaaactgcagaccctctctggaatgcttctcaattggagatggttcactatggg
aagatgcacggttttatgagaatgtactgggcaaaaaagattctcgaatggacaagtggt
cctacagaagctcttgcaattgctataactttaaatgacaagtacgaaattgacgggagg
gatccaaatggttatgtaggctgcatgtggtcaatttgcggtgtacatgaccagggttgg
cgggagcgtccagtttttgggaaaataaggtatatgaactacgccggctgcaagaggaaa
tttgatgttgatgggtacattgcatacgtgaaaagattagcaggtgagagtaagaaaaga
aaggcagaaatctag
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