KEGG   Coffea arabica (coffee): 113702970
Entry
113702970         CDS       T11342                                 
Name
(RefSeq) peroxisome biogenesis factor 10
  KO
K13346  peroxin-10
Organism
carb  Coffea arabica (coffee)
Pathway
carb04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    113702970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:carb04121]
    113702970
Ubiquitin system [BR:carb04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Peripheral membrane proteins
    113702970
SSDB
Motif
Pfam: Pex2_Pex12 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_4 zf-rbx1 RING_XB3-XBAT31 zf-RING_5 Prok-RING_4 zf-RING_6
Other DBs
NCBI-GeneID: 113702970
NCBI-ProteinID: XP_027079964
UniProt: A0A6P6TN89
LinkDB
Position
8e:1041950..1047486
AA seq 400 aa
MRLAESLRDSGDVRSSREEAGPSGTSGSAPDSTARVRRFPLAAQPEIMRAAEKDDQYASF
VYEACRDAFRQLFGTRVAMAYQNETKLLGQMLYYVLTTGAGLQTLGEEYCDIIQVAGPYG
LSPTPARRALFIFYQTAVPYIAERVSSRIASRGISLADSLSDDLLLDDASQSTHIQPPDN
DEVAVSLLSAFSRWKAKVVGLWSYAVQRWPSVLPFAREILQLVLRTNLMFFYFEGLYYHV
SKRAAGIRYVFISKTTSQRPRYQILGVFLLVQLCIIAAEGLRRSNLSSIASSVHQASPGT
YQTSAGRGLPVLNEEGNLISGDTEKSSWVSDLASTSESSATGVSKCTLCLSNRQHPTATP
CGHVFCWNCIMEWCNEKPECPLCRSPVTHSSLVCLYHSDF
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgcgcctcgcagaatcactaagggattctggagatgtcaggagtagtagagaggaggct
gggcctagcggtacctctggctctgctccagatagcactgctcgtgttaggaggtttcca
ttggcggcgcaacctgaaattatgagagctgctgagaaggatgaccagtatgcttccttt
gtctacgaagcctgtcgtgatgcctttcgtcagctttttggtacaagagttgcgatggct
tatcagaatgagacaaagcttttgggccagatgctttattatgtgttaacaacaggcgct
ggactacaaacgttgggagaagaatactgtgacatcattcaggttgcaggaccatatggg
ctttcaccaacacctgctaggcgtgccctctttatattctatcaaacagcagttccttac
attgcagaaagagtcagctcaagaattgcttctcgcggcatctcacttgctgattcacta
tctgatgatcttcttcttgatgatgctagccagagcacccatatacaacctcctgataat
gatgaagttgcagtgtccttattatcagctttttccagatggaaagcaaaagtagttgga
ctatggtcctatgcagttcagaggtggccatcagtccttccttttgcccgtgagatttta
cagttggttctccgcactaacctcatgtttttctattttgaaggtctctattatcatgtt
tcaaaacgtgctgcagggattcgctatgtcttcatcagcaaaactaccagccaacgacca
cgatatcaaatattaggtgtttttcttctagttcagctttgtatcattgctgccgaagga
ttgcgccggagtaatttatcttccattgccagttcagttcatcaagcatctcctgggacc
taccaaacatctgcagggcgtggtttacctgttttgaatgaagaaggcaatctcataagt
ggggatactgaaaagagtagttgggtctctgatctggcatcaacttctgagtctagtgcg
actggagttagcaaatgcacactttgcttaagcaaccgccaacacccgacagccactcct
tgtggtcacgtgttttgctggaactgcattatggagtggtgtaacgaaaagcctgagtgt
cctctctgtcgttctcctgtaactcattcaagcctagtctgtctctatcattcagatttt
tag

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