Coffea arabica (coffee): 113702970
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Entry
113702970 CDS
T11342
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
carb Coffea arabica (coffee)
Pathway
carb04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113702970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113702970
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
113702970
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
RING_XB3-XBAT31
zf-RING_5
Prok-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
113702970
NCBI-ProteinID:
XP_027079964
UniProt:
A0A6P6TN89
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Position
8e:1041950..1047486
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AA seq
400 aa
AA seq
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MRLAESLRDSGDVRSSREEAGPSGTSGSAPDSTARVRRFPLAAQPEIMRAAEKDDQYASF
VYEACRDAFRQLFGTRVAMAYQNETKLLGQMLYYVLTTGAGLQTLGEEYCDIIQVAGPYG
LSPTPARRALFIFYQTAVPYIAERVSSRIASRGISLADSLSDDLLLDDASQSTHIQPPDN
DEVAVSLLSAFSRWKAKVVGLWSYAVQRWPSVLPFAREILQLVLRTNLMFFYFEGLYYHV
SKRAAGIRYVFISKTTSQRPRYQILGVFLLVQLCIIAAEGLRRSNLSSIASSVHQASPGT
YQTSAGRGLPVLNEEGNLISGDTEKSSWVSDLASTSESSATGVSKCTLCLSNRQHPTATP
CGHVFCWNCIMEWCNEKPECPLCRSPVTHSSLVCLYHSDF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgcagaatcactaagggattctggagatgtcaggagtagtagagaggaggct
gggcctagcggtacctctggctctgctccagatagcactgctcgtgttaggaggtttcca
ttggcggcgcaacctgaaattatgagagctgctgagaaggatgaccagtatgcttccttt
gtctacgaagcctgtcgtgatgcctttcgtcagctttttggtacaagagttgcgatggct
tatcagaatgagacaaagcttttgggccagatgctttattatgtgttaacaacaggcgct
ggactacaaacgttgggagaagaatactgtgacatcattcaggttgcaggaccatatggg
ctttcaccaacacctgctaggcgtgccctctttatattctatcaaacagcagttccttac
attgcagaaagagtcagctcaagaattgcttctcgcggcatctcacttgctgattcacta
tctgatgatcttcttcttgatgatgctagccagagcacccatatacaacctcctgataat
gatgaagttgcagtgtccttattatcagctttttccagatggaaagcaaaagtagttgga
ctatggtcctatgcagttcagaggtggccatcagtccttccttttgcccgtgagatttta
cagttggttctccgcactaacctcatgtttttctattttgaaggtctctattatcatgtt
tcaaaacgtgctgcagggattcgctatgtcttcatcagcaaaactaccagccaacgacca
cgatatcaaatattaggtgtttttcttctagttcagctttgtatcattgctgccgaagga
ttgcgccggagtaatttatcttccattgccagttcagttcatcaagcatctcctgggacc
taccaaacatctgcagggcgtggtttacctgttttgaatgaagaaggcaatctcataagt
ggggatactgaaaagagtagttgggtctctgatctggcatcaacttctgagtctagtgcg
actggagttagcaaatgcacactttgcttaagcaaccgccaacacccgacagccactcct
tgtggtcacgtgttttgctggaactgcattatggagtggtgtaacgaaaagcctgagtgt
cctctctgtcgttctcctgtaactcattcaagcctagtctgtctctatcattcagatttt
tag
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