Coffea arabica (coffee): 113702980
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Entry
113702980 CDS
T11342
Name
(RefSeq) transcription factor HY5
KO
K16241
transcription factor HY5
Organism
carb Coffea arabica (coffee)
Pathway
carb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
113702980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113702980
Transcription factors [BR:
carb03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
113702980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
TSC22
bZIP_Maf
GAS
GIT_CC
MIC19_MIC25
Phlebovirus_NSM
FlaC_arch
DMPK_coil
NRBF2
M
APG6_N
Macoilin
Uso1_p115_C
DivIC
Motif
Other DBs
NCBI-GeneID:
113702980
NCBI-ProteinID:
XP_027079979
UniProt:
A0A6P6TNA1
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All DBs
Position
8e:complement(693757..697053)
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AA seq
157 aa
AA seq
DB search
MQEQATSSLAASSRPSSSERSSSSALHVEVKEGMESDDEIRRVPEIGGEVAGASASGRDG
GSVAGPVQPSAAGSRKRVRSPADKENKRLKRLLRNRVSAQQARERKKAYLIDLEARVKEL
ETKNAELEERLSTLQNENQMLRQILKNTTAGAQDGRK
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagcaagctacaagttctctagcagccagctccaggccttccagcagtgaaaga
tcttccagctctgcccttcacgttgaagtcaaagaaggcatggagagtgatgatgagatt
cgaagagttcctgagatcggaggggaagttgccggtgcttcagcttccgggcgggacggc
ggttcagtcgccggaccagttcagccatctgcagctggttcaaggaagagagttagaagc
ccagctgataaagaaaacaagaggttgaagaggttgttgaggaatagagtatcagcacag
caagcaagggaaaggaagaaggcatacttgattgacttggaggccagggttaaagaattg
gaaacaaagaatgcggagcttgaagagaggctttccacgttgcaaaatgagaaccaaatg
ctcagacaaatactgaagaacacaacagcaggtgcacaggatgggagaaagtga
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integrated database retrieval system
