Coffea arabica (coffee): 113703400
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Entry
113703400 CDS
T11342
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
carb Coffea arabica (coffee)
Pathway
carb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113703400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carb02000
]
113703400
Transporters [BR:
carb02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
113703400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113703400
NCBI-ProteinID:
XP_027080550
UniProt:
A0A6P6TR06
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Position
8e:42852709..42860610
Genome browser
AA seq
1448 aa
AA seq
DB search
MEGSDAIRISSARLSSSNIWRNSGLDVFSRSSREEDDEEALTWAAIEKLPTCLRIRRAIL
TEEEGSKEIDVENLGELEKKNLLERLVKIAEEDNEKFLLKLRKRMDRVGISLPTIEVRFE
HLNVDAQAHASSRALPTIFNFTVNILESFFNYLHILPNRKKKLTILRDVSGIIKPGRMTL
LLGPPSSGKTTLLLALAGKLDSDLKVSGRVTYNGHEMKEFVPERTSAYISQYDLHMGELT
VRETLSFSARCQGVGPRYEMLVELSRREKELNIKPDPDIDVFMKAASLEGQEASVITDYI
LKVLGLEVCADTLIGDEMIRGISGGQRKRVTAGEMMVGPARALFMDEISTGLDSSTTFQI
VNSIKQSIHILEGTTVISLLQPAPETYDLFDDIILLSDGEIVYQGPRESVLEFFEHMGFK
CPERKGVADFLQEVTSKKDQEQYWAQRDEPYNFISSREFSEAFQSFHVGRKLGDELAIPF
DKAKGHPAALTTKRYGVSKKELLKACTAREYLLMKRNSFVYIFKMIQLILMASIAMTVFL
RTNMHKNTTADGGIFVGALFYSIVMIMFNGFSELALSILKLPVFYKQRDFLFFPAWAYSL
PTWILKIPISFVEAIVWSCMTYYTIGFDPDIQRFFRHFFLLVCINQMASALFRCMAAIGR
NIIVANTAGTCALVTVLVLGGFVLSKDDIKKWWIWGYWLSPLTYAQTAISVNEFLGKSWS
KVPPGAIEPLGVLVLKSRRIFTEAKWYWIGVGGLIGYILVCNYLFTLALTYLNPFGKSRA
VVPQEISDESQDSTRSKLIELSSGRKRASERDNEVGRSVSSRSISSRVGSTNEVNQNRKK
GMVLPFEPLSITFDNIRYAVDMPQEMKAQGVTESQLELLKGVSGAFRPGVLTALMGVSGA
GKTTLMDVLAGRKTGGYIDGRISISGYPKKQETFARIAGYCEQTDIHSPHVTVYESLQYS
AWLRLPPEVDAATRKMFIEEVMELVELNPLREALVGLPGVNGLSTEQRKRLTVAVELVAN
PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGG
EEIYVGPLGRHCSKLINYFEGIPLVNKIKDGYNPATWMLEVTSAAQEVALGIDFAEVYKN
SEVYRRNKELIKELSTPVPGSKDLYFPTQYSQSFFIQCMACLWKQHLSYWRNPPYSAVRF
LFTTFIALMFGTIFWDLGSKRKSKQDIFNAMGSMYAAVIFLGVQNATSVQPVVAIERTVF
YRERAAGMYSALPYAFGQVVIEIPYNFVQTLIYGIIIYAMIGFEWTVAKFFWYLFFMFFA
LVYFTYYGMMTVAVTPNANIAAIVSSAFYALWNLFSGFMIPKPRIPVWWRWYYDLSPVSW
TLYGLVASQFADIEHDLDTNETVKHFIESYFGFKHDFVVYVAIIHVGISVLFGFIFAYSI
KAFNFQKR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtagtgacgcaattagaataagcagtgcacgtttaagtagctcgaatatatgg
aggaacagtgggttggatgttttctccaggtcctccagagaagaagatgatgaagaggca
ttgacatgggcagccatagagaaacttccaacttgtcttcgtataaggagagccattttg
acagaagaagaaggctcgaaagagattgatgtagagaaccttggagaattagagaaaaag
aatcttctcgagagactggtgaaaattgctgaggaagacaatgagaagttcttgctgaag
ctcaggaagcgaatggaccgagttggtattagtcttcctacgattgaagttcgttttgaa
catttgaatgttgatgcacaagcccacgctagcagtagagcactgccaacaatcttcaat
ttcactgtcaatattctagagagcttcttcaattatctccacattctaccaaataggaag
aaaaagctcacaatccttcgggatgtcagtggaattatcaagcccggaagaatgaccttg
cttttaggcccacccagttctgggaaaaccactttgctcttggctttggctgggaaactt
gattcagatctgaaggtctctggaagagtgacatataatggccatgaaatgaaggaattt
gtaccagaaaggacatcggcttatataagtcaatatgatcttcatatgggagaactaact
gtcagggaaacactatctttttcggcaagatgtcaaggggttggaccccgttatgaaatg
ttggtagaattgtcaagaagagagaaggaattaaacattaaaccagaccctgatattgat
gttttcatgaaggcagcatcacttgaagggcaagaggccagcgttattacagattacatt
ctcaaggttttgggacttgaagtgtgtgcggataccttgattggtgatgaaatgataaga
gggatttctggaggtcaaagaaagagagttacagctggagaaatgatggttggaccagcc
agggcacttttcatggatgaaatatcaactggattggacagttctacaactttccaaatt
gtgaattcaattaagcagtcaatccatattcttgaagggactacagttatctcactcctg
cagcctgcaccagaaacctatgacttatttgatgatataatccttctgtcagatggtgag
atagtctatcaaggccctcgtgaaagtgttttagagttctttgaacacatgggtttcaaa
tgtcccgagagaaaaggagttgctgatttcttacaagaggtgacatcaaagaaagatcaa
gagcagtactgggcacaaagggatgaaccttataactttatttcctctagggaattttca
gaagcgtttcagtcattccatgttggacgaaaactaggtgatgaacttgccattccattt
gacaaagccaagggtcacccagctgctctaactactaagaggtatggggttagcaaaaag
gagctcctgaaggcatgcacagcaagagagtacttgcttatgaagagaaactcatttgtc
tacatattcaaaatgatacaactaatccttatggcatccatagcaatgactgtgtttcta
cgaactaacatgcacaagaatacaacagcggatggtggaatttttgtgggtgccctgttt
tattccattgttatgataatgttcaatggattctctgagcttgccctgagcattctgaag
cttcctgttttctacaaacagcgagactttctcttcttcccagcatgggcatattctctc
ccaacatggatcctcaagatcccaatatccttcgtcgaagccatagtttggtcatgtatg
acttactatacgattggatttgatccagacattcaaaggttctttagacatttctttcta
cttgtatgtattaaccaaatggcgtcagcattattccggtgtatggcggcaataggaagg
aacatcatagttgcaaacactgctggtacatgtgcattggtgacagttcttgttcttggg
ggattcgttttgtcaaaagatgatattaagaaatggtggatatggggttactggctctct
ccacttacttatgcacagactgctattagtgtcaacgaatttcttggaaaaagctggagc
aaggttcctcctggtgccatagagccattaggtgtgttagtcttaaagtctcgtcgtatc
ttcacagaagcaaagtggtattggattggcgtagggggtttaattggatatatcctagtt
tgcaattatcttttcaccctggcactaacttatcttaacccatttgggaaatctcgggca
gttgtacctcaagaaatctcagatgagagtcaagacagcacgcgaagtaagcttattgag
ttatcttcaggaagaaaaagagcttctgaaagggacaatgaagttggaagaagcgtttct
tccagatctatctcatccagagtgggaagtaccaatgaggttaaccaaaacagaaaaaaa
gggatggttctaccttttgaacctctatctatcacttttgataatatcagatatgcagta
gatatgccacaggaaatgaaagctcaaggtgttactgagagccagctagagcttttaaaa
ggtgtaagtggtgcttttcgaccaggagttttgacagctctaatgggtgtcagtggggcg
ggtaagaccacactaatggatgtcttggctggaagaaaaacaggaggatatattgatgga
aggatctccatatcagggtatccaaagaagcaagaaacttttgctcgtatagcaggatac
tgtgagcaaactgatattcactccccccatgttactgtatatgagtccttacaatactct
gcctggctccggttgcctcctgaagttgatgctgcaacgagaaagatgttcattgaagag
gtcatggagcttgttgagctgaatccattgagggaagcactagttggattgcccggagtt
aatggcctttcaaccgagcagcgcaaaaggctgactgttgctgttgagctggtagctaat
ccatctataattttcatggatgaaccaacctcagggctggatgcgagggcagctgcaatt
gttatgagaacagtaaggaacacagtggacacaggtcgaactgttgtatgcacaatccac
cagccaagcattgacatctttgatgcttttgatgagcttctcctcctaaaacgaggcggc
gaggaaatatatgttggtccattggggcgacattgttcgaagctcatcaactattttgag
ggaatccctttagtcaataaaattaaagatggttataatcctgcaacttggatgttagag
gttacttcagcagcacaagaagtggcccttggcattgactttgcagaagtgtataaaaac
tcagaagtatataggagaaataaggaattgatcaaggaactcagtacacctgttccaggc
tccaaggatttatacttcccaactcagtattcccagtccttcttcatccagtgtatggct
tgcctctggaaacagcacttgtcatattggcgaaatccaccatactcagcagtcagattc
ttgtttacaaccttcatagcattaatgtttggtacaattttctgggatcttggctccaaa
aggaagagtaagcaagatatcttcaatgcaatggggtcgatgtatgctgctgtcatattt
ctcggagtgcaaaatgctacatcagtgcagcctgttgttgctatagagagaacagtcttc
tatagggaaagagctgctggaatgtattcagcattgccatatgcttttggacaggtcgtg
atcgagattccatataatttcgttcaaacgctcatatatggcatcataatatatgcgatg
attggattcgagtggacagttgccaagttcttttggtatctattcttcatgtttttcgct
ttagtatacttcacatattacgggatgatgacggtggctgttactccaaatgcaaatatt
gctgcgatagtttcatctgcattctatgcattatggaatcttttctcaggattcatgatc
ccaaaacctaggattccagtgtggtggagatggtactacgacttgtctccagtttcttgg
acactgtatgggttagttgcttcacagtttgcagacatagagcatgatcttgacaccaat
gaaaccgtgaaacacttcattgagagttactttggattcaaacatgactttgtggtatat
gttgccatcattcatgtgggaatttctgttcttttcggcttcatttttgcctattcaatc
aaggcatttaacttccagaaaagataa
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