Coffea arabica (coffee): 113703498
Help
Entry
113703498 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K13210
far upstream element-binding protein
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113703498
03041 Spliceosome [BR:
carb03041
]
113703498
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113703498
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113703498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
113703498
NCBI-ProteinID:
XP_027080676
UniProt:
A0A6P6TST5
LinkDB
All DBs
Position
8e:complement(47071903..47077797)
Genome browser
AA seq
683 aa
AA seq
DB search
MAEELQYGSDSLSNKRKYEDSQAALPSRSRPTGFSAPISSQSPPDSKQPPAYNTVPPPMD
EIQLAKQKAQEIAARLFNNVDPSKKPRVDNGGSGGYDSIEPVVQKPLSGAPSVPSSYGYP
GLSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPHSLTRGVELMGTPDQ
ITKAEQLINDVLNEADAGGSGIVSRRVTGQPAGADQFVMQIPNNKVGLVIGKGGDTIKNM
QARTGARIQVIPLHLPPGDTSTERTLQIDGTSEQIEAAKQLVNEVIAENRMRNSSMGGGY
PQQGYQARPPASWAPPGPPMQQPGYGYLQPGAYPGPAPQYNMNQPPYPGYPPQPTSGGYT
SGWDQTTAPSNQQNAQGGGYDYYSQQQPPQQQQAPGGPGGPTDNSAYGYNQAPASGYSQG
QGYPQDGYGGYQSTVPQSGYAQSQPNAVPGYDQQQGYHSASGYGSVSNPPTDGHTPSYGT
QADASQAPPVQSSATGQQGYAAGQQPSPNPNYPPQGAAQPGYGVPPTSQAGYGTQQPSGY
GSSYGPPQTQKPPTSQPAYGQTQQSPTAQGGYGQPGYPPAQSGYGPPSTGYGAPASQPGY
GAPASQSGYGAPPYGGPPASQSNYGQQATYSSAYSGGYSNSQQPPAYSSDGSSGGNPRGA
YDSTTASQASQQPSGVSKASPQE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaattgcagtacggttcggactcactctccaataagaggaagtacgaagac
agccaagcggctcttccgtctaggagccgaccgactggattttctgctccgatctcttct
cagtcgcctccggactccaagcagcctccggcttacaacaccgtcccaccgcctatggat
gagatccagcttgctaaacagaaagctcaggaaattgctgccaggctctttaacaacgtt
gatcctagcaagaagcctagggttgataacggtggcagtggtggatatgactccatagaa
cctgtggttcaaaagcccttgagtggtgctccttcagtgccaagttcatacgggtatcct
ggtctaagtaagaagatagagatacctaatggacgggttggagttattattggtaaaggt
ggggagaccattaagtaccttcagcttcagtctggtgcaaagattcaagttaccagggat
atggacgcagaccctcattctctgactcgaggggttgagctgatgggtacccctgatcag
attacaaaagctgagcaattaattaatgatgtccttaatgaggctgatgcaggtggttca
ggcatagtttctcgaagggtaactggacaaccagctggagctgatcaatttgtcatgcag
attccaaataacaaggttggacttgttattggtaaaggaggtgataccataaaaaacatg
caagccagaaccggtgctcggattcaggtgataccgttacacttgcccccaggtgataca
tccactgaaaggacactacaaattgatggcactagcgaacagattgaggctgcaaaacaa
ttggtcaatgaagtcatcgctgagaatcgtatgcgtaattcttctatgggaggaggttat
cctcagcaaggttaccaagctcggcctcctgcaagctgggctcctcctggtccaccaatg
caacaacctggctatggttaccttcagcctggagcttaccctggccctgctcctcagtat
aacatgaatcagccaccttaccctggttatccccctcaacctacctctggtggatatacc
tctggctgggaccagacaactgctccatcaaatcagcagaatgctcagggaggtggctat
gattactatagccagcagcagcctccacagcaacagcaggctccgggaggtcctggtggt
cctacagacaattctgcctatggttataatcaggctccagcttcaggttatagtcaaggg
caaggttatcctcaggatggttatgggggataccaatctactgtccctcaatctggatat
gctcaatcccagccaaatgctgtacctgggtatgatcagcaacaaggttatcattctgca
tctggatatggtagtgtatcaaacccaccaactgatggccatacaccttcgtatggaact
caagctgatgccagccaagctccacctgtgcagtcatctgctactggccagcaaggttat
gctgctggtcagcagccaagtcctaatcctaattaccctccgcaaggagctgcccagcct
ggttatggagtacctccaacttcccaagctggttatgggactcagcaaccgtcaggttat
ggctcaagctatgggcccccgcagactcaaaagcctcctactagtcaaccagcttatggg
caaactcagcagtcacctactgcccaaggaggttatggccagcctgggtacccacctgct
caatctggttatggaccaccatcgactggttatggagcccctgcatctcagccaggatat
ggagcccctgcatctcagtcaggatatggagccccgccttatggcggaccaccagcgtct
caatctaactacgggcagcaggcaacgtacagcagtgcttatagtggtggttactccaac
tcccagcaaccaccagcatactcttctgatggcagttcaggtggcaatccccggggagca
tatgattcaactacagcgtctcaggctagccagcagccaagcggggtctcaaaagcctcg
cctcaggaatga
DBGET
integrated database retrieval system
