Coffea arabica (coffee): 113703639
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Entry
113703639 CDS
T11342
Name
(RefSeq) phospholipase D alpha 1-like isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00564
Glycerophospholipid metabolism
carb00565
Ether lipid metabolism
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
carb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
113703639
00565 Ether lipid metabolism
113703639
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113703639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113703639
Enzymes [BR:
carb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
113703639
Membrane trafficking [BR:
carb04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
113703639
Endosome - Golgi transport
Others
Others
113703639
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc
PLDc_2
C2
Motif
Other DBs
NCBI-GeneID:
113703639
NCBI-ProteinID:
XP_071918304
UniProt:
A0ABM4VFJ9
LinkDB
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Position
8e
Genome browser
AA seq
828 aa
AA seq
DB search
MKMMVKDYNCITNYIFLFFFFPFPFSARKLFSWKTSGPGKMARGFCARVKRAVLCRPEIV
GSRLYATIDLERARVGRTRMIEKQLSNPRWYEGFRICCAHMVSNVIFTVKDDNAVGATLI
GRAYLPVEEIINGFIVDRWLQILDEDGIPIQGGPKIHVKLQFFSVNQDPNWSRGIGGSLA
FKGVPRTFFKERQGCHVTLYQDAHMPDTGFSNYLESKLRYEPQRCWEDIFDAINNAKHLI
YMTGWSVYTQITLIRDPNRPKPGGDITLGELLKKKANEGVRVLLLVWDDRTSVETLKRDG
LMATHDQETGDFFRDTNVHCVLCPRNPDDGNSIIQGFEVSTMFTHHQKTVIVDSEIPGSG
GEPKRRIVSFLGGIDLCDGRYDTITHPLFSSLNTAHHDDFHQPNFPDSNIRKGGPREPWH
DVHCKLEGPAAWDVLYNFEQRWQRQVGNKYLFSLNELYRFAIPPSPVTKSEDHETWNVQV
FRSIDGGAAYGFPEDPAEAAQVGLVSGKDHIIDRSIQDAYIHAIRRAKNFIYIENQYFLG
SSYGWEGNDIQVPDINALHLIPKELSLKIVSKIEAGEKFTVYVVIPMWPEGIPESASVQA
ILDWQRRTMEMMYKDIARALQAKGEGDDVDLRDYLTFFCLGNRESREAGEYVPPETPNPD
TDYARAQKSRRFMIYVHAKTMIVDDEYIIVGSANINQRSMDGARDTEIAMGGYQPHHLSN
AEPAKGSIFQFRMALWLEHLDVHDYVFYHPGTLECVRQVNLLAERSWELYSSDTFPDNED
LSVRLLRYPVNVSRDGIITALPGLDFFPDTKARVLGTKSDYLPPILTT
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatggtcaaagattacaattgcattaccaattatatatttctcttttttttt
tttccctttcccttttctgctcggaaactattttcgtggaagactagcggccccgggaaa
atggcaagaggattttgtgcccgagttaagagagctgtcttatgccggccagagattgtt
ggttcgagactatatgctaccattgatttagaaagggctcgagttggacgaaccagaatg
atagaaaaacagctttccaatcctcgttggtacgaaggctttcgaatatgttgtgcccat
atggtctctaatgtcattttcactgtaaaagatgacaatgctgttggagcaacactaatt
ggaagagcttatttgcccgtcgaggagatcataaatggattcatagttgacagatggctc
cagattttggatgaagatggcatcccaatacaaggtggaccaaaaattcatgtgaagctg
caatttttcagcgtaaatcaggatcccaattggtctcgaggaatcggaggtagtctagca
tttaaaggggttccccgtactttcttcaaggaaagacaaggttgccatgttaccctctac
caagatgctcatatgcccgacactggcttttcgaattacctcgaatccaaattaagatac
gagcctcagaggtgttgggaggatatatttgatgccatcaacaatgcaaaacacttgatt
tatatgacaggatggtctgtttatactcagatcaccttgataagggatccaaataggcct
aagccagggggagatattactcttggcgagctgctaaagaagaaggcaaatgaaggtgtg
agggtcctgttgcttgtttgggatgacagaacttcagttgagactcttaagagggatggt
ctgatggcaacacatgatcaagaaacgggtgatttctttcgtgacacgaatgttcattgt
gttctttgtcctagaaatcctgatgatgggaacagcataatccagggatttgaggtttcc
accatgtttacccatcaccaaaagacagtaatagtggactctgaaattccaggatcgggg
ggcgagccgaagaggagaattgtgagttttcttggcggaattgatctctgtgacgggaga
tatgatacgataactcatcccttgttcagctctctaaatactgcccatcatgatgatttt
catcaacccaattttccagactccaatatcaggaaaggtggccccagggagccatggcat
gacgttcactgcaagctggaaggacctgcagcttgggatgtactgtacaatttcgaacag
cgatggcagaggcaagtcggaaacaagtatctgttctcccttaatgagctttatagattt
gccatccccccatcaccagtgaccaagtcggaagatcacgaaacatggaatgttcaagtt
tttcgctcgattgatggtggtgctgcttatggcttccctgaagatcctgcggaggcagct
caagtaggacttgttagtgggaaggaccacattatagacagaagcattcaggatgcttac
attcatgctatccgtcgcgcaaagaatttcatttacatcgaaaatcagtacttcttggga
agctcgtatggttgggaagggaatgatatacaggttccggacatcaacgcattgcacctc
attcccaaagagctctcactgaagatcgtgagcaagatagaagcaggggagaaattcaca
gtctacgttgtaattcctatgtggccagaagggattccagagagtgcatctgtccaggcg
atactagattggcaaaggaggacaatggagatgatgtataaagatattgctcgagcactc
caagctaagggtgagggggatgatgtagaccttagagactacctaacgttcttctgcctt
ggcaatcgggagtcccgagaggctggagaatatgtgcctccagaaacccccaatcctgac
actgattatgccagagctcaaaaatctaggcgcttcatgatctatgttcatgccaaaacc
atgatagtggatgatgaatacataatcgtggggtctgcaaacatcaatcagaggtcgatg
gatggagcaagagatacagagattgcaatgggagggtatcagcctcatcatctttcaaat
gcagaaccagcaaagggcagcatatttcaattcagaatggccctgtggttggaacatctt
gatgtacatgattacgtgttttatcatccagggacattggaatgtgtcaggcaagtgaat
ttacttgcagagagaagttgggagctctactcgagtgatacatttcctgataatgaggac
ctctcggtccggcttctgaggtatcctgtgaatgtttcaagggatggaatcattactgca
ctacctggacttgatttctttcctgacaccaaagcccgtgttcttgggacaaaatctgat
taccttcctccaatccttactacttga
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