Coffea arabica (coffee): 113703717
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Entry
113703717 CDS
T11342
Name
(RefSeq) protein IWS1 homolog 1-like isoform X1
KO
K17498
transcription factor SPN1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113703717
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113703717
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med26
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
113703717
NCBI-ProteinID:
XP_027080973
UniProt:
A0A6P6TR68
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Position
8e:4183674..4188393
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AA seq
526 aa
AA seq
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MGYENDPYRDEDGEPLMDYDDDVNSDHEQDQQQHHHLLDDDEEDDDGWNRRERSPPTPVH
DEYKSKPRKRLIKKSSASEPVADFRLRDDDAGDFGVGEEDGVAGLVRDESEDGGGPSSSS
GGGGGGKRKRLGKESGGGERKKKEKRREGKGEKKFKVRKAGHSGGGRSRDYEDEEGMWKT
VAGENSEDDREGVRTLDDDNFIDDAGVDPADRYGSDREHSPSNAPQAEEGEEDEEIKQLF
KKGKKKKKNEKSASEIAYLVESVMAELEVVAEADADLNRQNQPAIIKLKKLPLLTEVLSK
KQLQQEFLDHGVLNILKNWLEPLPDGSLPNINIRAAILKILTDLPIDLEQHDRREQLKGS
GLGKVVMFLSKSDEETTANRKLAKDLIDKWSRPIFNKSTRFEDMRNFEDERAAFRRPSVK
KPMSKGAGMESRDDDLDLAGYSQGSKSGQSSSRQHASRPEAMSMDFVVRPQSKVDPEEVR
ARAKQIVQDQRRLKMNKKLQQLKAPKKKQLQATKLSVEGRGMVKYL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggctacgaaaacgacccgtatagagatgaagatggagagccattgatggattacgac
gatgatgtcaactccgatcatgaacaggaccagcagcagcatcatcatctcctcgacgat
gatgaggaagacgatgacggttggaaccgcagggagcggtcgccgcctactccggtccac
gatgagtacaaatcaaagccacgaaagcggctgattaagaagtcgtctgcgagtgagcca
gtggcggattttcggctgagggacgatgatgcgggtgattttggggttggagaggaggat
ggcgtagcgggtttggtgagggatgagtcggaggacggaggggggccgtcgtcgtcttct
ggaggtggaggtggtgggaagaggaagaggttggggaaggagagtggtggtggagagagg
aagaagaaggagaagaggagggaagggaaaggggagaagaagtttaaggtgagaaaagca
gggcattctggaggagggaggtcgagggattatgaagatgaggaggggatgtggaaaacg
gttgctggagagaattctgaggatgaccgagaaggtgttaggacgctggatgatgataac
ttcatagacgacgctggtgtggatcccgctgaccgatatggaagtgaccgtgaacattct
cctagcaatgcgccccaggcagaagaaggagaggaggatgaggaaatcaagcagctcttt
aaaaagggcaagaaaaagaagaaaaatgaaaaaagtgcttcagagattgcatatctggtc
gagagtgtcatggctgaacttgaagttgttgctgaagctgatgcagacctaaatagacag
aatcagcctgcgataattaaactgaagaagctgcctcttcttacagaggtgctttcaaag
aagcagttgcaacaagaatttttagatcatggagttttgaatatattgaaaaactggctt
gagccccttcctgatggaagcttacccaatattaacatccgtgcagcaattctgaagatt
cttactgatttgccaattgatttagagcagcacgatagaagagagcaattaaagggaagt
ggtcttggaaaggttgttatgtttctatcaaaatcggatgaagagactactgccaaccgg
aaacttgcaaaggacttgattgataaatggagtcgacccatattcaataagagcacaagg
tttgaagacatgcgaaactttgaagatgagagggctgcatttaggaggccatctgttaaa
aagccaatgagcaaaggtgcaggaatggaatccagagatgatgatcttgatttagctggc
tactcacagggatcaaaatctggccagtcatcttctagacaacatgcctctagacctgaa
gccatgtctatggattttgtggtacgaccccaatccaaggttgatcctgaagaagttagg
gcccgggctaaacaaattgttcaagatcagcgtcgtctgaagatgaataagaagttgcag
cagttgaaagctccgaagaaaaagcagctgcaagctacaaaactcagcgtggagggtcgt
gggatggttaaatacttgtaa
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