Coffea arabica (coffee): 113703755
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Entry
113703755 CDS
T11342
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Module
carb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113703755
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113703755
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
TGF_beta
Motif
Other DBs
NCBI-GeneID:
113703755
NCBI-ProteinID:
XP_027081032
UniProt:
A0A6P6TSR0
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Position
8e
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AA seq
413 aa
AA seq
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MHSMGLQIISLIVCIAASYPDGGLAAVFNVTGFGAIGDGIHDDTEAFSQAWEAACSNGEG
SSSVIVPAGRTFLLSPVNFEGPCYCSNVHFQVLGKIVAPNETDAWKGCVSDSWLHFSDIP
GLVLEGSGVIDGRGSPWWKNVSLGILKNALHIHKCDGLQLRGLHHVNSPKSHISINKCNG
VSISGLNILAPENSPNTDGIDVSESTHVLISDSIIQTGDDCVAINGGSSDIQMTNVSCGP
GHGISVGSLGANGSYATVEQVNVTKCNFQGTQNGIRIKTWPGGSGYARNISFEDITLQDV
ENPIIIDQFYCKGEFKCEDKPSPSAVQVSHVTYQGVNGSSSGEKAIQLFCSESKGCTDIK
MQQINITSAIPGAKTYAICKNAYGESSSTSPPVPCLTQHHDDVLGREASAVWV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcatgggtctacaaatcatatccttgatagtttgtatagctgcatcgtatcca
gatggtggcctggctgctgtttttaatgttaccgggtttggtgccattggagatggaata
catgatgacactgaggctttttcacaagcttgggaagctgcttgttcaaatggtgaaggt
tcaagtagcgtcatagttccagcaggaaggacattcctactgagcccagtgaattttgaa
ggcccctgctactgttccaatgtacattttcaggttttgggaaaaattgtggcgcccaat
gaaactgatgcgtggaaaggctgcgtatcagatagttggcttcacttttcagacatacct
ggtctggtcctggaaggttcaggggtgattgatgggcggggttcaccctggtggaaaaat
gttagccttggcatcctcaagaatgctctacacatccacaaatgtgacggccttcagttg
aggggacttcatcatgtcaacagtcccaaaagccatataagcatcaataagtgtaatggc
gtatctatatctggactcaacattcttgcacctgaaaacagtccaaatactgatggaatt
gatgtgtctgaatccactcatgttttaatttccgactccattattcaaactggggatgac
tgtgttgcgataaatggtggcagttctgacatacaaatgacgaacgtttcatgcggacct
ggacacggaataagtgttgggagcttgggggcaaatgggtcatatgcaacggtggagcaa
gtaaatgtaacaaaatgcaacttccagggaacacagaatggtataagaatcaagacatgg
ccggggggttctggatacgccagaaatataagctttgaggatatcacacttcaagacgtg
gagaaccctataataatcgaccagttttattgcaagggtgaatttaaatgtgaagataag
ccttcaccatcagctgtgcaagtgagccacgtaacctaccagggagtgaacggatcttct
tcgggcgagaaagcaattcaattgttctgcagtgagagcaaaggatgcactgacatcaaa
atgcaacaaataaacataacctctgctattcctggagcaaagacatatgccatctgtaaa
aatgcctacggggagtcctcctcaacttcacctcctgttccctgcctaacgcagcatcat
gacgatgtcttggggagagaagccagtgcggtttgggtctga
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