KEGG   Coffea arabica (coffee): 113703866
Entry
113703866         CDS       T11342                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
carb  Coffea arabica (coffee)
Pathway
carb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113703866
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:carb03021]
    113703866
Enzymes [BR:carb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     113703866
Transcription machinery [BR:carb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     113703866
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 VMAP-M5
Other DBs
NCBI-GeneID: 113703866
NCBI-ProteinID: XP_027081150
UniProt: A0A6P6TSM7
LinkDB
Position
8e:7046098..7055486
AA seq 1205 aa
MDASDAIKDSGIGSSKDNLFDQSLSMDIDDIDFDDFDDMLNSITLRELGEDFLKKFCKKA
ATAFFEQYGFISHQINSYNNFVKYRIQEVFDSVGEIVVEPGFDPSKRGDGDWKYASIKFG
KVILEKPDIWIGEKLFGEGKNEYLKVLPRHARLQNMTYSARIKVETHVQVYTKKLLRSDK
AKTGMAEYVENHCEKEEKKEIIIGRLPVMVRSELCWMNEAEKDDCEFDHGGYFIIKGAEK
TFIAQEQICMIRLWLSRVPNWMVSYRPIAKRKRVYLKLVSNSKFENIIGGEKVLSVYFAV
AEMPVWILFFALGASSDREVVDLINLDIEDTKIANILTESIYDADDNCTDFRRGKNALDH
VHKLLKNCKFPPAESVEECIRNLLFPNLTGFKQKARFLGYMVKCLLEAYTGRRKVDNRDD
FRNKRLELASELLERELKVHLKHAERRMVKAIQKDIYGDYELRGIETYVDASIISNGLSR
AFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVGDARYPHPSHW
GKICFLSTPDGENCGLVKNLASLGLVSTTVLESLLDKLLDCGLKLLQDDTSSSTHEEHKI
FLDGDWIGTCKDSALFVAELKNKRRSKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLLVV
ENLKRIKDLKGEDCSFQSLLDRGIIELIGPEEEEDCVTAWEIGLLYTGSKEKPPMKYTHC
ELDQSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPSIRVDTNIHQLYYPQ
KPLFRTMLSDSLGKPSYPRHRGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMNRASLER
GMFRSEHIRSYKSDVDETENLGKRHKPEDFVKFGKMPSKIGRVDSLDDDGFPFIGASLQT
GDIVIGKYSETGTDHSVKLKHTEKGMVQKVVLSANDEGKNFAVVSLRQVRSPGLGDKFSS
MHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALAKGIALGGAQK
YATPFSTLSVDAIGDQLQRLGFSRWGNERMYNGRTGEMIHTMVFMGPTFYQRLTHMAEDK
VKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAASNLHERLFTLSDSSEMHI
CRKCRSMANVIQRPVLGGRKIRGPFCRLCESAEDIVRVNVPYGAKLLCQELFSMGISLKF
DTELC
NT seq 3618 nt   +upstreamnt  +downstreamnt
atggatgcatctgatgccataaaagattcgggaattgggagtagcaaagataacttattt
gatcaatccttatcgatggatattgatgacattgactttgatgatttcgatgacatgctc
aactctataaccctacgggagttgggtgaagatttcttgaagaaattttgtaagaaggca
gcaacggccttttttgaacagtatggtttcattagtcatcaaatcaattcttacaataat
ttcgtcaagtatcggattcaagaagtctttgactctgttggtgagattgtggttgagcca
gggtttgatccttcaaagcggggtgatggagattggaaatacgcatctataaagtttggc
aaagtcattcttgagaagccagacatttggataggtgagaagttatttggagaaggtaaa
aacgagtatctaaaagtgcttcctcgtcatgcccggcttcagaacatgacttattcagct
aggataaaagtggagactcatgtacaggtctacaccaagaagcttctaagaagtgacaag
gcaaaaactggaatggcagagtatgtagagaatcattgtgaaaaggaggagaagaaggag
atcataattgggaggctccctgttatggtgaggtctgagttatgttggatgaatgaagcc
gaaaaggatgattgcgaatttgaccatggtggatatttcattatcaagggtgctgaaaag
acatttattgcacaggagcaaatctgcatgataaggctttggctgtctcgtgtcccaaac
tggatggtttcttaccgtccaattgctaaaaggaaaagagtgtatctgaagctagttagt
aattcaaaatttgagaatatcattggaggagaaaaggttctttctgtttattttgctgtt
gctgaaatgcccgtgtggatactgttttttgcccttggtgcatcttctgatagagaggtg
gtagatttgatcaatttggacattgaagacaccaaaattgcaaatatacttactgaatcg
atatatgatgctgatgataattgtacggacttccgcagaggtaagaatgctcttgatcac
gttcataaacttctgaagaactgtaaatttcctcctgctgagtctgtggaagaatgcatc
agaaatctactgtttccaaatttaactggctttaagcagaaagcccgcttccttgggtac
atggtgaagtgtctattggaagcatatactggccggcgaaaggttgacaaccgggatgat
ttcagaaacaagagattggagttggcttctgagctgttggagcgggagctgaaggtacac
cttaaacatgctgagaggcgtatggtgaaggctattcaaaaagatatctatggagattat
gaactgcggggcattgaaacctatgtggatgcatcaatcatttcgaatggtctttcaaga
gcattttcaactggagcatggtcacatccttacaagaaaatggaaagggtttctggagtg
gtcgctacccttaggcggacaaaccccttgcagatgactgctgacatgaggaaaacacgg
cagcaggtttcatatactgggagagttggtgatgctagatatccgcacccttcacactgg
ggaaagatatgctttctctctactccagatggagaaaattgtgggcttgttaaaaactta
gccagcttgggacttgtcagcacaacagtattggaatctcttcttgacaaattacttgat
tgtggtttaaaattattacaagatgatacttcatcctcaacacatgaagagcacaagatt
tttttggatggggactggattgggacatgcaaggattctgcattatttgtagcagagcta
aagaataagcgtcggagcaaggagatcccacagcaggtggaaataaagagagatgaaaag
catagagaaatccgtgtattttctgatgctggaagggttcttcgtcccctcctagttgtt
gagaatctgaaaaggatcaaagatttgaaaggggaggactgttctttccaatctcttttg
gacaggggaatcattgaacttattggacctgaagaggaagaagattgtgtaactgcttgg
gaaattggcttgttgtacacaggcagcaaagagaagcctcccatgaaatatacacattgt
gaacttgaccagtcattcttattaggtttaagctgtggaattatcccatttgctaaccat
gatcatgcacgaagggtcttgtaccagtctgagaagcactctcaacaggctattgggttt
tccactacaaacccaagtatcagagttgatacaaatatccatcaattgtattatccccag
aagccacttttccgaaccatgctttcagattctcttggaaagccttcctatcctcgtcat
agaggaatgctgccacgacctgaatattttaatgggcaatgtgctatagtggcagttaac
gtacatcttggttacaatcaggaggattccttggtaatgaatcgtgcttcactagagcgt
ggcatgttccgatccgagcatataagaagctacaaatcagatgtagatgagacggaaaac
ttggggaagaggcacaagcctgaggactttgtaaagtttggaaagatgccgagtaaaatt
ggacgcgttgacagccttgatgatgatggttttccattcattggtgctagcctccagact
ggtgacatagtcataggtaaatattcagaaacagggaccgatcatagtgtgaaactaaag
cacactgaaaaaggcatggttcagaaggttgtactttcagctaatgatgagggcaagaac
tttgctgtggtatctctgaggcaggttcgttctccaggtctgggcgacaagttttcaagc
atgcatgggcagaagggtgttctgggtttcctagaatctcaggagaattttccatttacg
gcacaaggaatagttccagatatcgtaattaatccacatgcatttccttcacgacaaact
cctgggcaacttttagaggctgcattggctaagggaattgctctaggaggtgcacagaaa
tatgccacacctttttcgaccttatctgttgatgctataggagaccaacttcagaggctt
ggattttcaaggtggggaaatgagagaatgtacaatggtcgaacaggtgaaatgattcat
actatggttttcatgggtccgacattttatcaacgccttactcatatggctgaagataaa
gtcaaatttcggaacacgggaccagtccatccactcactcgtcagccagtggcagacagg
aagcggtttggtgggataaaatttggtgagatggaacgggattgccttatagctcatggt
gctgcatcaaatttgcacgaacgcctcttcactctcagcgattcttcagagatgcatatc
tgtcgcaaatgcaggagtatggccaatgtaatccagaggccagtgctcggtggccgcaag
attcgtggccctttctgtcggttatgtgagtctgcagaagacattgttagggtgaatgtg
ccttatggtgccaagttgctttgtcaagagcttttcagcatgggcatatctctgaagttt
gacactgagttatgctga

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