Coffea arabica (coffee): 113703883
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Entry
113703883 CDS
T11342
Name
(RefSeq) beta-adaptin-like protein C
KO
K12392
AP-1 complex subunit beta-1
Organism
carb Coffea arabica (coffee)
Pathway
carb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113703883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113703883
Membrane trafficking [BR:
carb04131
]
Endosome - Golgi transport
Others
AP-1 complex
113703883
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
HEAT_EZ
Atx10homo_assoc
Arm_2
Motif
Other DBs
NCBI-GeneID:
113703883
NCBI-ProteinID:
XP_027081184
UniProt:
A0A6P6TRV6
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Position
8e:complement(51239482..51246854)
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AA seq
901 aa
AA seq
DB search
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLEALKDLISDNNPMVVA
NAVAALAEIQEHSSKPIFEITSHTLSKLLTALNECTEWGQVFILDALSKYRAADAREAEN
IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPAQV
QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPAEAFVTRVKTSQRTEEDDFADG
SETGNSESPAYAPDSSTSPPASSSSAQYVGREAVAAPAASAAPALVPDLLDLGLDNSSAI
VSVDQPATPAGPPLPVLLPAATGQGLQISAQLVRRDGQVFYSMLFENDSQIPLDGFMIQF
NKNTFGLAAGGPLQVPQLQPGTSASTLLPMVLHQNISPGPPSTLLQVAVKNNQQPVWYFS
DAISFLVFFAEDGKMERSTFLETWKSLPDSNEVSKDFPGIVMNSVEVTLDRLAASNMFFI
AKRKHANQEVLYLSAKIPRGVPFLIEITAVIGIPGLKCAIKTPSPELAPLFFEALENLLK
S
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacacgactcgaagtatttttccaccacaaagaagggtgaaatccctgaactc
aaagaagaactcaattcccagtacaaggataagagaaaagatgcagttaaaaaagtcatc
gctgctatgactgttgggaaagatgtatcatcgctcttcactgatgttgtgaactgcatg
caaactgagaatttggagctcaagaagcttgtttacttatatctcataaattatgctaaa
agccagccagatcttgctattcttgctgtaaatacatttgtaaaggactcacaagaccca
aatcctttgattcgtgcactggctgtgcgtactatgggttgcattcgtgttgataaaatc
acagaatatctttgtgacccactccaacgctgtctcaaggatgatgatccatatgttcgc
aagacagctgctatttgtgttgctaaactttatgacatcaatgctgagctggtcgaggat
aggggttttctggaagctcttaaggatttgatatctgacaacaatccaatggttgtagca
aatgctgttgcagctcttgcagagattcaagaacatagcagtaaaccaatttttgagatc
accagtcacacattgtcaaagcttctgactgctcttaatgaatgcactgagtggggtcaa
gtttttatattggatgctctttccaagtatagagcggctgatgctcgtgaagctgaaaat
atagttgagcgagttactccaagattgcagcatgcgaattgtgcggttgttctttcagca
gtcaagatgatccttcagcaaatggaactgataaccagcactgacgtagttcgaaatctc
tgcaagaaaatggctcctccccttgttactttgctttccgcagaacctgagattcagtat
gttgcattaaggaacataaacttgattgtacagaaacggccaacaatccttgcccatgaa
ataaaggtgtttttctgcaagtataatgatccaatttatgtgaagatggaaaaactggaa
atcatgataaagcttgcttcagaccggaatatagaccaggtcctgttggagttcaaagaa
tatgctacagaagtggatgtggattttgtcagaaaagctgtccgtgctattggacgctgt
gccatcaagcttgagagagctgctgagcgatgcattagtgtcttgcttgagttgatcaag
attaaagtgaactatgttgttcaagaagctataatagtcatcaaagatatctttaggaga
tatcctaacacctatgaatccatcattgctacactttgtgagagcttggacactttggac
gagccagaggcaaaggcatcaatgatatggataattggtgaatatgctgaacgaattgac
aacgctgatgagcttcttgaaagctttttagagagtttccctgaggaacctgcacaagtc
caattgcagttgctcacagcaacggtcaaacttttccttaaaaaaccaactgaaggccca
caacagatgattcaggttgtgttgaataatgcaacagtggagactgacaatcctgatttg
cgagatcgtgcctacatatattggcgtcttctctcaactgatccagaggcagcgaaggac
gtcgtgctagctgaaaagcctgtgattagtgatgactcaaatcaacttgacccatctcta
cttgatgagcttctagcaaacatagctactttatcctctgtctatcacaagccggctgaa
gcatttgtaactcgtgttaagacctctcagagaactgaggaagatgactttgctgatgga
agtgaaacaggaaattctgaatcacctgcctatgcacctgacagcagtacttcaccacca
gcttcttcaagttctgcgcagtatgtaggaagggaggcagtggctgctccagctgcatct
gcagctcctgcacttgtgcctgatttgcttgacttgggcttggataatagcagtgctatt
gtgtctgttgatcagcctgcaactcctgctggccctcctttgcctgttctattaccagct
gctactggtcagggtttacaaatcagcgcgcagcttgtacgaagagatggacaagtattt
tacagcatgttgtttgagaacgactcccagattccacttgatggtttcatgatccaattt
aacaagaatacatttggccttgctgctggtggaccactgcaggttccccaattgcagcct
gggacttctgcaagtacccttttgcctatggttctgcaccagaatatatcccctggtcct
ccgagtacacttctgcaagttgctgtgaaaaataatcaacagcctgtatggtacttcagt
gatgcaatatcattcctggtattttttgccgaggatgggaaaatggaacgcagcactttt
cttgagacatggaagtcattacctgattcaaatgaggtatcaaaggactttccagggatt
gtgatgaatagtgtggaagtaaccctggatcggttggctgcttctaatatgtttttcatt
gccaagcgcaagcacgcaaaccaggaagtgctatatctttctgcaaaaattccgagagga
gttcctttcttaattgaaatcacagctgttattggaatacctggtctgaagtgtgcaatc
aaaacgcctagtcctgaattggctccacttttctttgaagccctcgagaaccttctcaag
agctaa
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