Coffea arabica (coffee): 113703887
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Entry
113703887 CDS
T11342
Name
(RefSeq) myosin-15 isoform X1
KO
K28914
plant myosin class XI
Organism
carb Coffea arabica (coffee)
Pathway
carb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113703887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
carb04812
]
113703887
Cytoskeleton proteins [BR:
carb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
113703887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Zeta_toxin
Flp1_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
113703887
NCBI-ProteinID:
XP_027081187
UniProt:
A0A6P6TTB5
LinkDB
All DBs
Position
8e:complement(796612..829775)
Genome browser
AA seq
1521 aa
AA seq
DB search
MTLRKGSKVWVEDRDSAWVAAEVTDFIGKQVQVLTQNGKKVLALPEKLHPRDAEADHGGV
DDMTKLTYLNEPGVLDNLQRRYGLNEIYTYTGSILIAVNPFTKLPHLYNLHMMEQYNGAP
FGELNPHVFAVADASYRAMMGEGRSQSILVSGESGAGKTETTKLIMQYLTYVGGRAAGDD
RTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDASGRISGAAIRTYLLERSRV
VQITDPERNYHCFYQLCASGLDAEKYKLGHPSTFHYLNQSKIYELDGVSNAEEYVKTRRA
MDIVGISSEEQEAIFRTLAAILHLGNVDFSPGKEHDSSTIKDQKSDFHLQMASNLLMCDV
NLLLATLCTRSIQTLEGVIIKALDCNAATAGRDALAKTIYARLFDWLVEKINRSVGQDHD
SRIKIGVLDIYGFECFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYHKEEINWSYIE
FIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHGTFSNKLFQNFRTHPRLEKAKFSETDF
TISHYAGKVSYQTETFLDKNRDYVVVEHCNLLSSSKCPFIAGLFPSSAEEFSRSSYKFSS
VASRFKQQLQSLMEILSSTEPHYIRCVKPNSFNRPQKFENQSILHQLRCGGVLEAVRISL
AGYPSRKTYHEFVDRFGIIALDMMDGRYDEKTMTEKILQRLNLRNFQLGKTKVFLRAGQI
AVLDTRRAEVLDSAAKCIQGRLRTFFARRDFLLHQSAGISLQACCRGHLARKLYTSIREE
TAAIIIQKYARRWLFRHAYVQLYMSIVFIQSSIRGFSARQKFLYRKEHRAASIIQAFWRM
CKIRSAYCHRQSNIIAIQCLWRQKMAKREFRRLKQEANEAGALRVAKTKLEKQLEDLTWR
LHLEKKLRVSNEESKLGEISKLHKTVESLSLQLDAAKLATVNEFNKSAVLQRQLELSMKG
KSALEREVVALSELRNENEILKNSLISLERKNSALERELVKAKQDTSSTIQKLEKVDLTC
SELQQNLRSLEEKLSNLEDENHVLRQKAISATPKSIRPGYVKPFLDKFSGALALSSADRK
PSFESPTPSKIIAPLSQGLSDSRYTKLTTERHQENYDILSRCIKENLGFKDSKPVAACVI
YRCLLHWHAFESERTSIFDFIIERINEVLKVGNEDTTLPYWLSNASALLCLLQKNLRSNG
YLNANSHRSPGFTGLNGTVTHVSKSPFKYIGLEDGLSFVEAKYPSLLFKQQLTACVEKIF
GLIRDNLKKEISPLLGLCIQAPKNQRVHGGKLSRSPGGVPQQSPSSQWDSIIKFLDSLMS
RLRENHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVTA
KEEFAGTSWHELNYIRQAVGFLVIHQKRKKSLDEIMQDLCPALTIRQIYRISTMYWDDKY
GTQSVSNEVVAQMRETLNKDSQNLTSNSFLLDDDLSIPFSTEDIYMALPPVDPSDVELPK
FLSEYPSAQFLVKNVNVNTLP
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgactttgcggaaaggctccaaggtttgggtggaagacagagactcagcttgggtcgca
gctgaagtgaccgattttataggtaaacaagtccaagttctcactcagaatggtaaaaag
gtattggcgttgccggagaagctgcatccgagggatgcggaagcggaccacggaggagta
gatgatatgacgaagttgacgtacttgaatgagcctggagtgcttgataatcttcagagg
agatatggacttaatgaaatttacacctacactggaagcattcttattgctgtcaatcca
ttcacaaagcttcctcatctatataacctacacatgatggaacagtacaatggggctcca
tttggcgagctgaatccgcatgtttttgctgtggcagatgcatcttatagggcaatgatg
ggggagggtagaagccagtccatattagttagtggcgaaagtggtgctggaaaaactgaa
acaacaaaactaattatgcagtatcttacttatgttggtggtcgtgcagctggagatgac
agaactgttgaacagcaagttcttgagtcaaaccccttgctggaggcatttggtaatgct
cggactgtgagaaatgataattcaagtcgctttgggaagtttgttgagatccagtttgat
gcaagtggtagaatatctggtgctgcaattagaacgtaccttctggagcgatcacgtgtt
gttcaaataacagatcctgaaagaaattaccactgcttctaccagttgtgtgcttctgga
ttggatgcggagaagtacaaacttggccatccaagtaccttccactacctgaatcaaagc
aagatttatgaattggatggcgtgagcaatgccgaggaatacgtcaaaacaagaagggca
atggacattgttggcattagctctgaggaacaggaagcaatatttcggacattggctgcc
atactgcatcttggaaatgtagatttttctcctggtaaagagcatgattcatcaactata
aaggatcaaaagtctgacttccatttgcagatggcctcaaaccttcttatgtgtgatgtg
aatcttttgctggctaccctctgcacgcgctcaatacaaactcttgaaggggtcatcatt
aaagctcttgactgcaatgcagccacagctggtcgggatgctttggcaaaaactatctat
gctcggctatttgattggcttgttgaaaagatcaatcgatctgttggacaagatcatgat
tcaaggataaaaataggagttttggacatatacggatttgaatgcttcaaacataacagt
tttgagcaattctgcattaattttgcaaatgaaaagcttcaacaacatttcaatgagcat
gtgttcaagatggagcaggaggaatatcataaagaagaaataaattggagttacattgaa
tttatagacaaccaagatgtcctggatctgattgagaagaagcccattgggataattgca
cttctggatgaagcttgcatgttccctaaatcaactcatggaacattttcgaacaaatta
ttccagaatttccggacccatccacggttggagaaggccaagttttctgaaacagatttc
accatttcccactatgctggcaaggtctcatatcagacagaaacattcttagataaaaat
cgtgattatgttgtagttgagcactgcaatctcttatcttcttcaaaatgtcccttcatc
gctggtctctttccttcatctgcagaagagttttctagatcttcatataaattttcttca
gtggcctctcggtttaagcaacaacttcaatctcttatggagatccttagttctacggag
cctcactatatccgctgcgtgaagccaaactcttttaatcggccccagaagtttgagaat
caaagcatcttacaccagttacgctgtgggggtgtattagaagctgttcgcataagtttg
gcaggttacccctctcggaagacctatcatgagtttgttgatcgatttggtattatagcc
ttggacatgatggatggacggtatgatgagaaaactatgactgagaaaatactacaaaga
ctaaatctcaggaactttcagttgggaaagaccaaagttttcctccgagctggtcaaatt
gctgtcttagacacgcgtcgtgcagaggttttagattctgctgcaaagtgtattcagggt
agattgcggacgttttttgcacgcagggattttctcttgcaccagtcagctggaatttcg
ttacaagcatgctgtagaggtcatcttgctcgaaaactgtatacttcaataagagaggaa
acagctgctattatcatacagaaatatgcccggagatggttgttcaggcatgcctatgtt
cagctttacatgtcaattgtattcatacagtctagcatccgtggtttctctgcacggcaa
aagtttttgtacaggaaggagcacagagctgcttctataattcaggctttttggaggatg
tgtaagattcgctctgcttactgtcaccggcaatctaatattatcgctatacaatgtctt
tggaggcaaaagatggctaaaagagaatttagaaggcttaaacaggaggctaatgaagct
ggtgccttgcgtgtagcgaagaccaaacttgagaagcagttagaagatcttacctggcga
ttgcacttggaaaaaaaattacgggtgtctaatgaagagtctaagttgggggaaatatca
aaacttcacaagactgtcgaatcgttaagccttcaattagatgctgcaaaacttgctaca
gtcaatgagttcaacaagagtgcagtgcttcaaaggcaattagaactatcaatgaagggg
aaatctgctttggaaagagaagttgtggctctgtctgaattaaggaatgaaaatgagatt
ttgaagaattctctgatttccttggagcggaagaactctgcactagagcgcgagcttgtc
aaggctaaacaagataccagttctactattcaaaagctggaaaaagttgacctcacctgt
tcagaacttcaacaaaatctaagaagtttggaagaaaagctctcaaatttggaagatgag
aaccatgtacttcgacaaaaagcaataagtgcaactccaaagagcatccgtcctggttat
gtcaagccttttctggataaattttcaggagcacttgctctttcctctgcagatcggaag
ccttcatttgagtcacctactccgtcaaaaattatagctcctctatcacaagggttatct
gattctcgctacacgaaattaaccactgaaaggcaccaggagaattatgatatactttca
aggtgtataaaagagaatttgggttttaaagatagcaagccggttgctgcttgtgtcatc
tatagatgcctcctccattggcatgcctttgaatctgagaggacttcgatttttgacttt
atcattgagagaatcaatgaggttctaaaggttgggaatgaggatacaaccttgccttac
tggttgtcaaatgcatccgctcttctgtgccttcttcaaaagaatttgcggtccaatgga
tacttaaatgcaaattctcaccgttcccctggtttcactgggcttaatggcaccgttaca
catgtttcaaaatcaccattcaaatatattggattggaggatggtttatcttttgtggaa
gcaaaatatccttcacttttattcaaacaacagttaactgcctgtgtggagaagattttt
gggttgatacgtgacaatctgaagaaagaaatatcccctcttctgggtctatgcattcag
gctcctaaaaatcaaagagtacatggaggtaaactatcacgatcacccggaggagttcct
caacagtcgccaagtagtcagtgggatagcatcatcaaatttttggattcccttatgagc
cgtcttcgagaaaatcatgtaccttcatttttcatccgcaagctcattactcaagttttc
tctttcatcaatatatcactttttaacagcctattgcttcgacgagagtgttgcactttt
tcaaatggagaatatgttaaatctggtctggctgaactggagaaatggatagtgactgca
aaagaggagtttgcaggaacttcttggcatgaactaaattacattagacaggctgttggc
tttctggtgattcatcagaagagaaaaaaatcattagatgagataatgcaggatctttgt
ccggcattgacgatcaggcaaatctatcgcataagtacaatgtactgggatgacaagtat
gggactcaaagtgtgtcaaatgaggttgttgctcagatgagagagaccctaaataaagat
tctcaaaatttgacatcaaattcattcttgttggatgatgatctaagcattccgttctca
acggaggatatttatatggcacttccgccagtagatccatcagatgtggagctccccaag
tttttgtcagaatatccttctgcacagttcctggtcaagaacgtaaatgtaaataccttg
ccttga
DBGET
integrated database retrieval system