Coffea arabica (coffee): 113704100
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Entry
113704100 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carb03400
]
113704100
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113704100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
TPR_14
Motif
Other DBs
NCBI-GeneID:
113704100
NCBI-ProteinID:
XP_027081563
UniProt:
A0A6P6TSY4
LinkDB
All DBs
Position
8e:complement(43913876..43948892)
Genome browser
AA seq
2526 aa
AA seq
DB search
MEDKETEFLCKLTANHLFLAQFEPLRATLRSLRVRSPELARSILQTIVAKGGRFDSVLWS
HHSCPSPSLLAFLSTLELLQFNEPVLGLWSFDENSLKLRAEFLLYVQIVSYRVVESVKKH
VELNGIQGNEGGFRNFNIPVEFLAKEDGFRILDEENGKCLWVLDRISNVGLSRLRPDMMV
VEGEEEREGVAESVEEIGEEEMMVLKRVILENAEVFDVLCVNIEKQLGMIQKDDSGMAIT
LRTEGKRMEVEDRVFRLAQRCVQIVHLDAMKELLDKNELDGVVSHLKYLHLDFGVEDMDY
RMVLEGLLRKVLPRRVNYGDSWFAVRDKLLSVYGEALSSSCIRLVQMIQVIQDELLSEEI
ETFKASENGRIHLPFHRLENFSAEMTPETTSNIKSVQLNIATSACTRDMYHYARVSGLHV
LECTMDAALTAVRDEQLEEASHILSLAPRLQPLVAVMGWDLLSGKTAMRRKLMQLLWTTK
SQVLRLEESPLYGNKSDEVSCVEQLCDTLCYQLDLASFVACVNSGQSWSLKLSILLSGKD
SKDGGDEDFQGDPFVENFVLERLSVQSPLRVLFDVVPSIRFQDAIELISMQPITSSLAAW
KRMQDIELMHMRYALESAIFALGSMEKCIAAGPGENEMTMGYLRDLKSHMDAIHNNTRKI
LMVNIIISLIHMDDLCLDLTPAVSHSSSGVVSVPVGEQDAAIHEGGNKMVVLFTGQFLDI
LRQNLPSSVLDSDDKVDPDIPTGGKQALEWRISKAKNFMDDWEWRLSILQRLLPLSDRQW
RWKEALTVLRAAPSKLLNLCMQKAKYDIGEEAVHRFSLPPEDKATLELAEWVDAAIKKAY
VEDAVSRAADGTAIQELDFSSLCSQLGAVAAILLCIDVAASSATLTSLSLKLLDQAQIML
SEIYPGGSPKVGSTYWDQIHEMAIISVTKRVLRCLIELLEQEKYPALQAILTGEIIPLVP
KEFQRQGHRERALVMLHQMIEDAHKGKRQFLSGKLHNLARAVADEETERDIVTGESPNTE
KKRGFQYGPDVALGLGLRTSKQLPSVSPTGDSSVLLNSYDVKETEKRLFGSLSSKPTTYL
SQFILHIAAIGDIVDGTDTTHDFNYFSVIYEWPRDLLTRLVFERGNTDAAGKVAEIMDAD
FVHEVISACVPPVYPPRSGHGWACIPVVPTFSRSYPESKILSPSSRDAKPGSYSRSSGTP
GIPLYPLQLDIVKHLVKLSPVRAILASVFGSSILYSGSDPTVSNSLNDDLLTTPETDRLF
YEFALDHSERFPTLNRWIQMQTNLHRVSEFAVMSDQTTSKNVDKLESKTAIKRYREHDSD
TESEVDEISVGKNIPVALPEHKDQISVASDPWHDSPKSRTAEHDTTVFLSFDWENEGPYE
RAVERLIDEGKLMDALALSDRFLRNGASDRLLQLLIECGEDANLMSEQSQGYSSHRMWSN
SWQYCLRMKDKHLAAILALKYLRRWELDAALDVLTMCNCHLLDSDPVKKEVVQMRGALLR
YNRILCADDHYSSWQEVEAVCKEDPEGLALRLAEKGAVSPALEVAESAALSIELRRELQG
RQLVKLLTADPLNGGGPAEASRFLSSLRDTDDALPVAMSAMQLLPNLRSKQLLVHFFLKR
RDSNLSEAEVSRLNLWALGLRVLAALPLPWQQRCSSLHEHPHLILEVLLMRKQLQSASLI
LKEFPSLRDNSVVLVYAAKAIAVSISSPFREHRISVSGPRAKQKTRTGTPTRSSFTSSLS
NFQKEARRAFSWTPRHTGDKTAPKDSHRKRKISGLTHSERVTWEAMAGIQEERVSLYSDG
QERLSSVSIAEEWMLTGDPIKDKAVRFSHHYESAPDITLFKALLSLCSDESVAGKGALDL
CINQMRNVLSSHQLPENASMETIGRAYHATETFVQGLLFAKSQLRKLSGGVDLSSNSERV
KDTDDASSDAGSSSVGSQSTDELSEVLMQVETWLGRAELLQSLLGSGIAASLDDIADKES
SSRLRDRLITEERYSMAVYTCKKCKIDAFPVWNSWGHALIRMEHYAQARVKYKQALALHK
GDPAAVVLEIINTIEGGPPVDVSSVRSMYEHLARSAPAILDDSLSADSYLNVLYMPSTFP
RSERSRRSQEAANDSSTNNLDLEDGPRSNLDSIRYLECVNYLQEYGHQHLLGFMFKHGHY
KDACCLFFPLNSVPSPPQPSSLGIVTSSSSPQRPDVLATDYGTLDDLCGFCIGFNAMPVL
EEIISTRVSTAASQDDSVKQHTAAALARICLYCETHKHFNYLYKFQVIKKDHVAAGLCCI
QLFMNSSSQEEAIKHLEHAKMHFDEGLSARYKSVDSTKVVTKGIRGKSASEKLSEEGLVK
FSARVAIQVDVVRCFNAEGPQWKYSLFGNPNDTETFRRRSEIAESLAEKNFDLAFQVIYE
VNLPAVDIYAAVAASLAERKKGGQLTEFFRNIKGTIDDDDWDQVLGAAINVYANRHKERP
DRLIDMLTSSHRKVLACVVCGRLKSAFQIASKSGSVADVQYVAHQALHANALPVLDMCKQ
WLARYM
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaagaaacagagttcctctgtaaactcacagcaaaccatctctttttagcc
caattcgagccacttcgggcgactttacgtagtctccgagtccgaagcccggagcttgcc
cgatcaattttgcaaacaattgtagccaaaggtggccgcttcgactcagtcctctggtct
caccattcctgcccttccccatccctcctcgcctttttgtcaaccctcgaacttttgcaa
ttcaatgaacccgttctggggctctggtcgttcgacgaaaatagcttgaaattgagggct
gagttcttgttgtatgtgcaaattgtaagttacagggtggtggagagtgttaaaaagcat
gtagagttgaatggaattcagggaaatgaaggcggctttagaaatttcaatatcccggtt
gagtttttggcgaaagaggacggttttaggattttggacgaggaaaatggtaagtgtttg
tgggttttggataggatttctaatgtgggtttgagccgattgaggccggacatgatggta
gtagagggagaggaggagagggagggggttgcagaatctgttgaggagattggggaagag
gaaatgatggttttgaagagggtaattttggaaaatgcagaggtttttgatgtgttgtgt
gtgaatattgagaaacagctgggtatgattcagaaggatgattcagggatggcaattaca
ttgaggacggaagggaaacgaatggaggtggaggatagggtgtttaggttggcgcaaaga
tgtgtccagattgtgcatttagatgctatgaaggaattattggacaagaatgagctggat
ggggtggtttcccatttaaagtatcttcatttggattttggtgtggaggacatggactac
cgaatggttttggaaggtctcctcaggaaggttttgccaagaagagttaactatggagat
tcctggttcgccgtgcgagataaattgttgtcagtttatggagaagcactttcttcatct
tgcatccgtcttgttcagatgattcaggttattcaagatgagttactttctgaggaaata
gagacattcaaagcttctgaaaatggcaggatccatttgccctttcatcgtcttgagaat
tttagtgcagaaatgacgcctgagacgacttcaaacatcaaaagtgttcagttgaatatt
gcaacatcagcttgcacgagagatatgtaccattatgctcgtgttagtggcttgcatgtt
cttgaatgcaccatggatgctgctctgactgctgtgcgggatgaacaacttgaagaagct
agccatattttgtcacttgctccgcgacttcaaccccttgttgctgtcatgggctgggat
cttttgtctggcaaaactgcaatgagaagaaaattgatgcaacttttgtggaccactaaa
tcacaagttcttcgcttggaggaatcccctttatatggtaataagtcagatgaggtttcc
tgtgttgaacagctctgtgatacattatgttatcagcttgaccttgcttcctttgttgct
tgtgtcaattctggccaatcatggagtctgaaattgtcaatactcttatctggcaaggac
tcaaaagatggtggagatgaagatttccagggggatccatttgttgagaattttgtgctg
gaaagattgtctgttcagagtccacttcgcgtactgtttgatgttgttccaagtataaga
tttcaggatgccatcgaattgataagcatgcagccaattacttctagtcttgcagcctgg
aagaggatgcaagatattgaacttatgcacatgcgatatgctttggaatctgcgattttt
gcattaggatcgatggagaagtgtatagccgctgggccaggagaaaatgagatgactatg
ggctatttgagagacctgaagagccatatggatgccatccataacaatactcgcaagata
ctgatggtcaatatcatcatctcgctaattcacatggatgatctctgtcttgatctgaca
cctgctgtatctcacagctcttctggagtggtcagtgttcctgtgggcgaacaagatgct
gccattcatgaagggggaaataagatggttgtattatttacaggacagtttcttgatatt
ttgcgccagaatctaccatcatcagtattggattcagatgataaagtggaccctgatata
cctactggtggaaagcaagctttagaatggagaatctcaaaggcaaagaacttcatggat
gattgggagtggcgtttgtcaattttacaacgccttttaccattatctgaccgtcagtgg
agatggaaggaagctttgactgtattacgcgctgccccttctaagttgctaaatctctgc
atgcaaaaggcgaagtatgacattggagaagaggcagttcatcgtttctctttaccgcca
gaagacaaggctactcttgagttagctgaatgggtggatgccgccattaagaaagcatat
gtagaggatgcagtctcacgtgctgcagatggaacagctatccaggagttggatttttcg
tccctgtgctcccaactgggtgctgtagcagctatcctcctgtgcattgatgtagctgca
tcgtctgcaacattgacaagcttatctttgaagcttttagaccaggctcaaattatgctt
tctgagatctatcctggaggttctccaaaggttgggtcaacgtactgggatcagattcat
gaaatggcaataatttctgtaacaaagcgagtcctaagatgtctaattgagttattggaa
caggaaaaatatccggctcttcaggccattttaacgggggagataattcccttagtcccg
aaggagtttcaaagacaaggacatagggaacgtgctcttgttatgttgcatcagatgatt
gaagatgcacacaagggaaaacgacaatttcttagtggcaagcttcataatctggctaga
gctgttgctgatgaagagacagaaagggatattgttactggagaaagtccaaatactgag
aagaaacggggttttcagtatgggccagatgttgctcttgggctggggttgagaacatcg
aaacagttaccttcagtttcacctactggtgatagcagcgtacttctcaacagctatgat
gtcaaagaaacagaaaagagattatttggatcattgagctccaaacctacaacgtatctt
tcacagtttattctccatattgctgcaataggggatattgttgatgggactgacacaact
catgacttcaactatttctctgtcatttatgaatggcctagagatcttttaactcgattg
gtctttgagcggggcaacacagatgcagctggaaaagtagcagaaattatggatgctgac
tttgttcatgaagtaatttctgcttgtgttcctcctgtttatcctccaagatctggtcat
ggttgggcgtgtattccagttgttcctacattttccaggagttatccagaaagtaaaatc
ctttcaccttcttctagagatgcaaaaccaggttcttatagccgttcctcgggcactcca
ggaatacctctgtaccctctccagctggatatagtcaagcatctcgttaaactgtcccct
gttcgggctatcttagcaagtgtgtttggaagttctatactgtacagtggaagtgacccc
actgtatctaattccttaaatgatgacttactaactacacctgagacagataggctgttt
tatgaatttgctcttgatcattctgagaggtttccaactttaaaccgttggattcaaatg
caaaccaaccttcaccgggtgtccgagtttgcagtaatgtctgatcagacaactagcaag
aatgtggataaacttgagtcaaaaactgctattaaacgatatcgggaacatgacagcgat
actgaatctgaagttgatgaaatttctgttggaaaaaatattccagttgcattaccagag
cacaaggatcaaatttctgtggcttctgatccctggcatgattctccaaaatccagaact
gctgaacatgatactacagtttttctttcctttgactgggagaatgaaggaccctatgag
agagctgttgaacgattgattgatgaagggaaattgatggatgctcttgctctttctgat
cgcttcttgcgcaatggtgcctcagaccggctacttcagctgctaattgaatgtggcgag
gatgctaacctaatgtctgagcaatctcaaggttactcaagccaccggatgtggagtaac
agttggcaatattgcctcaggatgaaggataagcatctggcagcaatacttgccctcaaa
tatttgcgcagatgggagctggatgctgcattggatgttctcaccatgtgcaactgtcat
ttgctagacagtgatcctgttaaaaaggaggttgttcaaatgagaggagctcttctgagg
tacaatcgcatactttgtgccgatgatcactatagcagctggcaagaggttgaggcagtg
tgtaaggaagatcctgaaggtcttgctcttaggctagccgagaaaggagctgtatctcct
gctttagaagtggctgaaagtgcagccctttccattgaactccggagagaattgcagggt
cgtcaacttgtgaagcttctcactgcagatcctttaaatggtggaggtccagcagaagct
tctcgtttcctttcttccctacgtgacactgatgatgctcttcctgttgcgatgagtgca
atgcagctattgcctaaccttcgatcaaagcagcttcttgttcactttttcctgaaaaga
agagacagcaacttgtcagaagctgaggtttcccggcttaacttatgggcattagggctt
cgtgtcttggctgccctgccattaccatggcagcaacgatgctcttccctgcatgagcac
ccacatcttattctggaggttttgctgatgaggaagcaactgcaatctgcttcgctgata
ctcaaggagttcccttcattgagagacaacagtgtagtccttgtatatgctgcgaaagct
attgctgttagtatcagttctcctttcagggagcatagaatttcagtttcaggtccaaga
gcaaaacaaaagacgagaacagggacgcctactcggtcatcctttactagcagcctaagc
aactttcagaaagaggctcgcagagcattttcttggaccccacgccatactggcgataaa
acagctccaaaggacagtcataggaagaggaagatatctggattaacacattcagaaagg
gtaacatgggaagcaatggctggcatacaagaagaacgtgtatcattatactcagatggg
caagagaggctttcttctgtttccatcgctgaggagtggatgctgacaggtgatcctatt
aaggataaagctgttcgtttttcccatcattacgaaagtgcgcctgatatcactctcttt
aaggcattactatcattgtgttcagatgagagtgtagcaggcaaaggtgctttagacttg
tgcattaatcaaatgcggaatgtgttaagctcccaccagttgcctgagaatgcatctatg
gaaactattggcagggcatatcatgccacagaaacatttgtgcagggtctactttttgct
aaatcccagctaagaaagctctctgggggagttgacttgtcgagtaactcagaaagagtt
aaggatacagatgatgcatcctcagatgctggcagctccagtgtgggtagtcagtctaca
gatgagctgtctgaagtactgatgcaagtagaaacttggctgggacgtgctgaattgctt
caaagccttttgggatctggcatagcagcctcgcttgatgatattgctgataaagagtct
tcatcacgtcttagggatcgactcatcacggaggaacgatacagcatggcagtctatact
tgcaagaagtgcaaaattgatgctttcccagtctggaattcctggggccatgctctaatc
cgcatggagcattatgcccaagcccgtgtgaaatataagcaagctcttgcactgcataag
ggtgatcctgcagctgtggttctggagatcattaacacaattgaaggaggtccaccggtt
gacgtttcatctgttcggtcaatgtatgaacatttggcacgaagtgcaccagcgatctta
gatgattctctttcagctgattcctatctcaatgtcttgtacatgccatcaacatttcca
cgttcagagagatctaggcgatcacaagaagctgcaaatgatagttcaacaaacaacttg
gaccttgaagatgggcctcgtagtaatcttgacagtattagataccttgaatgtgttaac
tacttgcaggaatatggccaccaacatttgcttggtttcatgtttaagcatggccattac
aaggatgcttgctgcttgtttttccctttgaattctgttccttcaccaccacagccatcc
tcacttggaattgttacatcttcttcttcccctcaaagaccagatgttttggccactgat
tatgggacccttgatgatttatgtggtttttgcattggatttaatgccatgcctgttttg
gaggaaataatatcgacgagagtttctactgctgcatcacaagatgactcagtgaaacag
cacactgctgcagcacttgcccgtatttgtctttactgtgaaactcataaacattttaat
tatctttacaagtttcaggtgatcaagaaggatcatgtggctgctggtctttgttgtatt
cagttgtttatgaactcctcctcacaagaggaagctataaagcacttggaacatgccaag
atgcactttgatgaagggttatcagctagatacaaatcagttgattctactaaagttgtt
accaaggggattcgaggcaaaagtgcttctgagaagctctctgaagaggggcttgtcaag
ttttctgctcgggttgcaattcaggtcgatgtagtcagatgcttcaatgcagagggaccg
caatggaagtactctcttttcgggaatccaaatgataccgaaacttttaggagaaggtct
gaaattgcagagtctctggctgagaagaattttgacttggcttttcaggtgatttatgag
gttaatcttccagctgtggacatatacgctgccgttgctgcttcacttgcagagaggaag
aagggaggtcaattaacggaattcttcagaaacattaaaggtacaatagatgatgacgat
tgggatcaagtgttaggggctgcaataaatgtgtacgctaacagacacaaagagcgtcct
gatcgactcattgacatgttgactagcagccacagaaaggtgctagcgtgcgtggtttgt
ggtaggcttaaaagtgccttccagattgcctctaagagcgggagtgtagcagatgttcaa
tatgtagcacatcaggcattacatgcaaatgcacttcctgtgcttgatatgtgcaagcaa
tggttggctcggtacatgtga
DBGET
integrated database retrieval system
