Coffea arabica (coffee): 113704198
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Entry
113704198 CDS
T11342
Name
(RefSeq) ABC transporter F family member 3-like isoform X1
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
carb03012
]
113704198
Translation factors [BR:
carb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113704198
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
PWI_ABCF3
AAA_21
SMC_N
AAA
AAA_15
AAA_22
ORC-CDC6-like
AAA_29
AAA_16
NACHT
DUF5906
RsgA_GTPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
113704198
NCBI-ProteinID:
XP_071916812
UniProt:
A0ABM4VBA5
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All DBs
Position
8e:52443626..52451110
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AA seq
716 aa
AA seq
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MTEVASSVVHEVLGRRAHDVDQPIVDYVINVLADEDFDFGADGEGVFEALGELLVDSGWV
PDFSECRLACSKLSEKFGKHGLVKAKPTVRSLTAPLRMFDGMDEEEAPKKKPEPVDGPLL
TERDKMKLERRKRKEERQREAQYQMHLKEMEAVKEGMPVVCVNHDQGDGAAVKDIHMENF
TVSVGGRDLIVDGSVTLSYGRHYGLVGRNGTGKTTFLRYMAMHAIDGIPNNCQILHVEQE
VVGDDTSVLQCVLNTDIERTQLLEEEAHLLELQRQADIEGEDGKTDEKLDSGVDKNAIAQ
RLEEIYKRLELIDADAAESRAASILAGLSFSSEMQKRATKTFSGGWRMRIALARALFIEP
DMLLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIIHLQGQQLTTYR
GDYDTFERTREEQLKNQQKAFESNERSRAHMQTFIDKFRYNAKRASLVQSRIKALERMAH
VDEVINDPDYKFEFPSPDDRPGPPIISFSDASFGYPGGSLLFKNLNFGIDLDSRIAMVGP
NGIGKSTILKLIAGELQPTSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVP
EQKLRAHLGSFGITGNLALQPMYTLSGGQKSRVAFSKITFKKPHILLLDEPSNHLDLDAV
EALIQGLVLFQGGVLMVSHDEHLISGSVEQLWVVSEGRVSPFGGTFQDYKKILQSS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagtggcgagctcagttgtacacgaagttttgggcagaagagctcacgacgtc
gatcaaccaatcgtcgactatgtaataaacgtcctcgctgacgaagacttcgatttcgga
gccgatggcgaaggcgttttcgaagccctcggcgaactcctcgtcgactctggctgggtt
cccgacttctctgaatgccgtttggcttgtagcaaactatcagagaaatttgggaagcat
gggttggtcaaggcaaaaccaactgtgagaagtcttacagcaccattaaggatgtttgat
ggaatggatgaagaggaagctccaaaaaagaagcctgagcctgtcgatggtcctttgctg
actgaacgtgacaagatgaagcttgaaaggagaaagaggaaagaagaacgccagagagag
gcacaataccaaatgcacttaaaagaaatggaagcagtaaaagagggaatgccagttgta
tgtgtcaatcatgaccagggtgatggagcagctgtcaaggatatccacatggagaacttc
actgtatcagtcggtggacgcgatctaattgttgatggttcagtaacactttcttatgga
aggcactatggccttgttggaaggaatggtacagggaaaactactttcctgcgctacatg
gctatgcatgccattgatggcattccaaataactgtcagatactgcatgtggaacaagaa
gtggttggtgatgatacatcagttttgcaatgtgttctgaacactgatattgaaagaacc
cagcttttggaggaagaagctcatctccttgaattacagagacaagccgacatagaaggt
gaagatggtaagactgatgagaagttagatagtggagtggataaaaatgccattgcacaa
aggctagaagagatatacaaacgtcttgaattgattgatgctgatgccgcagaatcgcgt
gcagcatctattcttgctggtctcagtttttcttcagaaatgcaaaagagagctacgaaa
acattttctggaggatggaggatgagaatagctcttgcacgtgcattatttattgagcct
gacatgttgctacttgatgaacccaccaatcatcttgaccttcatgctgtcctgtggctg
gaatcgtacttggtgaaatggccgaagacatttattgttgtctctcatgctagagagttc
ttgaatactgttgtcacagatattatccatttgcaagggcaacaactaactacatacaga
ggggattatgatacatttgaaagaacgcgagaggaacagcttaagaatcaacagaaagca
tttgagtcaaatgaacgttcaagggctcatatgcagaccttcattgacaaattccgctat
aatgcgaagcgtgcatctcttgttcagtcgaggatcaaggcactagaaaggatggcacat
gtagatgaagtcatcaatgaccctgactacaagtttgagttcccttctcctgatgataga
cctggcccaccgattataagtttcagtgatgcatcatttggatatcctggtggctcatta
ctgttcaagaatttgaattttggaatagatctggatagccgcatagctatggtcggtcca
aatggcattggaaaatcgaccatacttaaattgattgcgggtgagcttcaacctacctcg
gggactgttttccgttcagctaaggttcggattgccgtcttcagtcagcatcacgttgat
ggtctagacctttcatcaaatcctcttctctacatgatgcgctgcttccctggcgtgcca
gaacagaagctgcgagcacacttgggttcttttggtataactggaaatcttgctcttcag
ccaatgtatactttgtccggtggtcagaaaagcagagttgcgttttccaagattactttc
aaaaaacctcatatcttactactagatgagccgtctaaccatcttgatctggatgctgtt
gaagctttaattcaaggccttgttctattccaaggtggcgttctgatggtgagccatgat
gagcacctaatttctggaagcgtcgagcagctttgggttgtatctgaaggcagggtctca
cctttcggcgggacattccaggattacaagaaaattctacaatcatcatag
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