KEGG   Coffea arabica (coffee): 113705081
Entry
113705081         CDS       T11342                                 
Name
(RefSeq) thioredoxin-like protein YLS8
  KO
K12859  U5 snRNP protein, DIM1 family
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113705081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    113705081
Spliceosome [BR:carb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    113705081
SSDB
Motif
Pfam: DIM1 Thioredoxin Thioredoxin_7
Other DBs
NCBI-GeneID: 113705081
NCBI-ProteinID: XP_027082766
UniProt: A0A6P6TYF0
LinkDB
Position
8e:complement(6165302..6168800)
AA seq 142 aa
MSYLLPHLHSGWAVDQAILAEEERLVLIRFGHDWDETCMQMDEVLASVAETIKNFAVLYL
VDITEVPDFNTMYELYDPSTIMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtcataccttctgcctcaccttcattccggctgggctgttgaccaggctatccttgct
gaagaggaacgacttgttctcatcaggttcggacatgattgggatgagacctgtatgcag
atggatgaagtgttagcatcagttgctgagacaataaagaactttgctgtgttatacttg
gttgatataactgaggtgcctgattttaatacaatgtatgagttgtatgatccatccaca
attatgttcttctttaggaacaagcacatcatgattgatcttggtactggaaacaacaac
aagatcaactgggcaatgaaggacaaacaggaatttattgacattgtcgaaactgtgtat
cgtggtgcaagaaaaggtcgtggtctagtcattgcacccaaagattactctaccaagtat
cgatattga

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