KEGG   Coffea arabica (coffee): 113706633
Entry
113706633         CDS       T11342                                 
Name
(RefSeq) DNA repair protein RAD5A-like isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:carb03400]
    113706633
DNA repair and recombination proteins [BR:carb03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    113706633
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 zf-C3HC4_2 Prok-RING_4 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 DEAD GP68 zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 113706633
NCBI-ProteinID: XP_027084368
UniProt: A0A6P6U1C3
LinkDB
Position
1e:complement(45608967..45616816)
AA seq 1054 aa
MGISKVTDELVLMVRSIVGAEYSNMDIVRALHMAKNDPTAAINIIFDTPGFRKPEIPKKP
EPLNRNLSPEPATVANPSVNGTDDHDSKAKNQNLCRVSASNGAVKARIEDSERERKVEDA
RCSSSNGCSSSSSMGSEWWLVGCGEVAGISTCKGRTLKPGEEVFFTFPVERKLSSPSPGK
SGGGRGRQVSSSSEIVRFSTNACGEIGRIPYEWARCLLPLVRDKKVRIDGHCKSAPPVLG
IMDSIILSVSVYINGSMFQKSHQASLKAASNDESVIHPLPTLFQLLGLSPFQKAEFTPGD
LYTKKRPLNLEDSFNVSAPLFPIPKFKSQSTLDGSKMENEESISDNDLDKIVGVADNSEL
LEMEPPSTLQCELHPYQKQALHWMIQLERGHCLDEAASTLHPCWDAYRLADKRGLVIYLN
AFSGDATTEFPSTLRMARGGILADSMGLGKTIMTIALLLTHSERGGSLGNQLTAQTLTGN
GEASLISDQSPTAKKAAKISGFEKLLKPKNFLTCGGNLIICPMTLIGQWKAEIETHAQPG
TLSIYIHYGQNRSRDALVLGQSDVVLTTYGVLASEFSAENADVTGGLFSVRWFRVVLDEA
HTIKSSKSQISMAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLKVEPWGSWAWWNKLVQ
KPFEEGDARSLKLVQSILKPIMLRRTKSSTDKEGRPILVLPPADIQVIYCELTEAERDFY
DALFKRSKVKFDKFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLT
RRFLKVGQDIVDGQARDVPSLAYVEEVVEELRKGEVGECPICLEAFEDAVLTPCAHRLCR
ECLLASWRSSTSGFCPVCRKMITKQELLTAPTQSRFRIDIERNWVESSKVSALLHELEIL
RLAGSKSIVFSQWTAFLDLLQIALSRSDIQFLRLDGTLNQQQRENVIKQFSEEDNIMVLL
MSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTEKVMIKRFIMKGTVEEK
MEAVQARKQRMISGALTDQEVRSARIEELKMLFA
NT seq 3165 nt   +upstreamnt  +downstreamnt
atgggtattagtaaagttaccgatgaattggttttgatggttcgatccatcgtaggcgct
gaatactcaaatatggatatagttcgagccctgcacatggccaagaatgatcccacggct
gcaattaacatcatttttgacactcccggttttagaaaacctgaaattcccaaaaaaccc
gagcctttgaatcgaaatttgagccccgagccggcaactgtggcaaatcccagtgtgaat
ggtactgacgatcatgatagcaaggccaagaatcagaatttgtgtcgggtttcggcttca
aatggggctgtaaaggctaggatagaggatagtgagagagagaggaaagttgaggatgcg
aggtgttcgagctccaatgggtgttcgagttcgagttcaatggggagtgaatggtggctc
gtggggtgtggtgaggttgcagggatttcgacgtgtaaaggaaggactctgaagcctggg
gaggaggtttttttcacatttccggtggagagaaagttgagttcaccttctcctggaaag
tctgggggtggtcgggggcggcaggtgtcttcttcttctgaaattgtcagattttccacg
aatgcttgtggagagattggccgcatcccatatgaatgggctcgatgcttattaccactt
gtgagggacaagaaagttagaattgatgggcattgtaaatccgctccacctgtattagga
attatggacagcattattctgtccgtcagcgtgtatataaacggttccatgttccaaaag
agccatcaggcttcactgaaagcagcctcaaatgatgaatcagttattcatcctctgcca
acgcttttccaattgctggggctctctccttttcagaaggcagaattcactccaggcgat
ttgtatacgaagaagcgtccgttgaacttagaggacagctttaatgtctctgcaccattg
tttcctattcctaaattcaagagccaatcaactctagatggaagtaagatggaaaatgag
gagtcaatatctgacaatgatcttgacaaaattgttggtgttgcagacaactctgaatta
ctggaaatggaacctccaagtactcttcagtgtgaacttcatccatatcagaagcaggct
cttcattggatgattcaacttgagaggggccattgcctggatgaagcagcatcaacgttg
cacccatgttgggatgcgtaccggcttgcagacaaaagggggcttgttatatacttgaat
gcattttctggcgatgcaacaacagaatttccaagcactcttcggatggccagaggagga
attctggcagattctatggggcttgggaaaactatcatgaccatagctcttcttctaaca
cattctgaaagaggtggttcattaggaaaccaattgacagcccagactttgactggaaat
ggtgaagctagccttatttcagatcaatctccaacggcaaaaaaagcggcaaaaatttct
ggattcgaaaagcttttgaagccaaaaaactttctcacatgtggtggaaaccttattatc
tgtccaatgacccttataggtcagtggaaggcagaaattgaaacccatgcacaacctggg
actttgtcgatttacattcactatgggcagaacagatcaagggatgcactcgttctaggc
caaagtgatgttgtgctcacaacttatggagttttagcctcagagttctcagcagagaat
gctgatgtcactgggggactcttctcagtgagatggtttagagtggtgctagacgaagca
cacacaataaagtcttcaaaaagccaaatttccatggctgcagctgcgcttgttgctgat
cgtcgatggtgccttactggcacccctatccagaacaacctagaagatctttacagtctt
cttcgatttttgaaggtggaaccatggggaagctgggcatggtggaacaaacttgttcag
aaaccttttgaggagggtgatgcgcgtagtttgaagttggtccaatcaatattaaagcca
attatgctaagaagaactaaatctagtactgacaaggaaggcaggccaattttggttctt
ccacctgctgatattcaagtgatatattgtgaacttacagaagcagagagggatttttat
gatgctttgtttaaaagatcaaaggtgaaatttgataaatttgtcgagcaaggacgtgtt
cttcacaattatgcttcaatattggagttgctcttgcgtcttcgtcaatgttgtgaccat
ccatttttagtgatgagtcggggcgacacgcaagagttctctgatctgaataagctcaca
agacgctttcttaaggttggtcaggacattgtggatgggcaagctagagatgtaccatca
ctggcttatgttgaggaggttgttgaagagttacgaaaaggggaagtaggagagtgcccg
atatgccttgaagcttttgaagatgctgtattgacaccatgtgctcatagactatgcaga
gaatgcctcttagcaagttggcgaagctctacttctggtttttgtcctgtttgtagaaag
atgattaccaagcaagaacttctcacagctcctactcagagtcgcttccggattgatatt
gagagaaattgggtcgaatcatctaaggtttctgctcttttgcatgaacttgaaattctt
cgcttagcagggtccaagagcattgttttcagccagtggactgcctttcttgatctattg
cagattgctctttctcggagtgatattcaatttcttcgtctggatgggacccttaaccag
caacaacgtgagaatgtaataaagcaattctcagaggaagataacatcatggttttgcta
atgtcattgaaggctgggggagttgggatcaacttaacagctgcatccaacgcttttgtc
ttggatccctggtggaacccagccgtagaggaacaagctgtaatgcgcattcatcgcatt
ggacaaactgaaaaagtaatgatcaaaaggttcatcatgaagggaaccgtagaagaaaaa
atggaagcagtgcaagcacgcaaacaacggatgatttctggtgctttgactgaccaagaa
gttagatcagcgcgcatcgaggagcttaagatgcttttcgcttaa

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