Coffea arabica (coffee): 113706788
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Entry
113706788 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K13210
far upstream element-binding protein
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113706788
03041 Spliceosome [BR:
carb03041
]
113706788
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113706788
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113706788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
113706788
NCBI-ProteinID:
XP_027084597
UniProt:
A0A6P6U3F2
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All DBs
Position
8c:complement(40755431..40761127)
Genome browser
AA seq
683 aa
AA seq
DB search
MAEELQYGSDSLSNKRKYEDSQAALPSRSRPTGFSAPISSQSPPDSKQPPAYNSVPPPMD
EIQLAKQKAQEIAARLFNNVDPSKKPRVDNGGSGGYDSIEPVVQKPLSGAPSVPSSYGYP
GLSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPHSLTRGVELMGTPDQ
ISKAEQLIKDVLNEADAGGSGIVSRRVTGQPAGADQFVMQIPNNKVGLVIGKGGDTIKNM
QARTGARIQVIPLHLPPGDTSTERTLQIDGTSEQIEAAKQLVNEVIAENRMRNSSMGGGY
LQQGYQARPPASWAPPGPPMQQPGYGYLQPGAYPGPAPQYNMNQPPYPGYPPQPTSGGYT
SGWDQTTAPSNQQNAQGGGYDYYSQQQPPQQQQAPGGPGGPTDNSAYGYNQAPASGYSQG
QGYPQDGYGGYQSTVPQSGYAQSQPNAVPGYDQQQGYHSASGYGSVSNPPTDGHTPSYGT
QADASQAPPVQSSAAGQQGYAAGQQPSPNPNYPPQGAAQPGYGVPPTSQAGYGTQQPSGY
GSSYGPPQTQKPPTSQPAYGQTQQSPTAQGGYGQPGYPPAQSGYGPPSTGFGAPASQPGY
GAPASQSGYGAPPYGGPPASQSNYGQQATYSSAYSGGYSNSQQPPAYSSDGSSGGNPRGA
YDSTTASQASQQPSVVSKASPQE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaattgcagtacggttcggactcactctccaataagaggaagtacgaagac
agccaagcggctcttccgtctaggagccgaccgactggattttctgctccgatctcttct
cagtcgcctccggactccaagcagcctccggcttacaacagcgtcccaccgcctatggat
gagatccagcttgctaaacagaaagctcaggaaattgctgccaggctctttaacaacgtt
gatcctagcaagaagcctagggttgataacggtggcagtggtggatatgactccatagaa
cctgtggttcaaaagcccttgagtggtgctccttcagtgccaagttcatacgggtatcct
ggtctaagtaagaagatagagatacctaatggacgggttggagtgattattggtaaaggt
ggggagaccattaagtaccttcagcttcagtctggtgcaaagattcaagttaccagggat
atggatgcagaccctcattctctgactcgaggggttgagctgatgggtacccctgatcag
atttcaaaagctgagcaattaattaaagatgtccttaatgaggctgatgcaggtggttca
ggtatagtttctcgaagggtaactggacaaccagctggagctgatcaatttgtcatgcag
attccaaataacaaggttggacttgttattggtaaaggaggtgataccataaaaaacatg
caagccagaaccggtgctcggattcaggtgataccgttacacttgcccccaggtgataca
tccactgaaaggacactacaaattgatggcactagcgaacagattgaggctgcaaaacaa
ttggtcaatgaagtcatcgctgagaatcgtatgcgtaattcttctatgggaggaggttat
cttcagcaaggttaccaagctcgacctcctgcaagctgggctcctcctggtccaccaatg
caacaacctggctatggttaccttcagcctggagcttaccctggccctgctcctcagtat
aacatgaatcagccaccttaccctggttatcccccccaacctacctctggtggatatacc
tctggctgggaccagacaactgctccatcaaatcagcagaatgctcagggaggtggctat
gattactatagccagcagcagcctccacagcaacagcaggctcctggaggtcctggtggt
cctacagacaattctgcctatggttataatcaggctccagcttcaggttatagtcaaggg
caaggttatcctcaggatggttatgggggataccagtctactgtccctcagtctggatat
gctcaatcccagccaaatgctgtacctgggtatgatcagcaacaaggttatcattctgca
tctggatatggtagtgtatcaaacccaccaactgatggccatacaccttcgtatggaact
caagctgatgccagccaagctccacctgtgcagtcatctgctgctggccagcaaggttat
gctgctggtcagcagccaagtcctaatcctaattaccctccgcaaggagctgcccagcct
ggttatggagtacctccaacttcccaagctggttatgggactcagcaaccatcaggttat
ggctcaagctacgggcccccgcagactcaaaagcctcctactagtcaaccagcttatggg
caaactcagcagtcacctactgcccaaggaggttatggccagcctgggtacccacctgct
caatctggttatggaccgccatcgactggttttggagcccctgcatctcagccaggatat
ggagcccctgcatctcagtcaggctatggagccccgccttatggcggaccaccagcttct
caatctaactacgggcagcaggcaacgtacagcagtgcttatagtggtggttactccaac
tcccagcaaccaccagcatactcttctgatggcagttcaggtggcaatccccggggagca
tatgattcaactacagcgtctcaggctagccagcagccaagtgtggtctcaaaagcctcg
cctcaggaatga
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integrated database retrieval system
