Coffea arabica (coffee): 113706827
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Entry
113706827 CDS
T11342
Name
(RefSeq) putative DNA (cytosine-5)-methyltransferase CMT1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00270
Cysteine and methionine metabolism
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
113706827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113706827
03032 DNA replication proteins [BR:
carb03032
]
113706827
03036 Chromosome and associated proteins [BR:
carb03036
]
113706827
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
carb02048
]
113706827
Enzymes [BR:
carb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
113706827
Transcription factors [BR:
carb03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
113706827
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
113706827
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
113706827
Prokaryotic defense system [BR:
carb02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
113706827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
113706827
NCBI-ProteinID:
XP_027084654
UniProt:
A0A6P6U2D0
LinkDB
All DBs
Position
8c:5296780..5311406
Genome browser
AA seq
1260 aa
AA seq
DB search
MATGKQPKDCNQLTSIIRRKSPRLLSSSRASSTPEAKPILNKKKKSRAASVNSEKSIVLS
MHLENEEAEAIPLQIYDPNLEVKCLRRSPRYTTNKYRSSSESKLLALPSSASTTPEIQRR
RSPRFLSEGKSANLTEMGGGFFGGSKKRLRFEENRSALHGSANGSGSKKVKVDFERLRKS
PRSNKSLDEDGNGNLNRGFLALPKPGSSGKSDLRKCKLSGKSLRKSPRLNPDMCGELLAL
PEPGSSVEKLVSHEKRLRNRIITMHVGKEKEKAQKSGSERMDSAEGNESSNVSEKLLRSR
KIRFKLPEASPKSELKAGSFGGSDKNNVSQKRLRSRKIEFKLTQISPNSDFAESSSGGSD
FGDMGKKRLRNNGIEFELPEALENNNSIDDDVDVSDDSEKIETELVDVSAVENCEVAVLS
EKFLRSRKIAYQIVGNEKVQEKSSLKKRGITRNKEPPVENKIPQKRERERKSVAFFVGEP
IPEEEARERWRWRYDLKSHRSKNEGWILNAGEEDETILNVDFHYAQANVDGCVLSIGDCA
YIKGEGRKKHIGRILEFFRTTQGEDYFRVQWYFRVEDTVIKEAATFHDEKRIFYSTMMND
NLLDCILSKVHVAEIPLAVGLEPDTIPPADFYYDMEYSVEYSTFHNLQTDNSYKIDDSHS
LQPVEGFHAPITATHLEVFSGSGPLKSELALLDLYSGCGGMSTGLGIGAKVSSIDVVTRW
AVDLEKSACDSLKLNHPETQVRNESAEDFLELLKRWKQLCESYIFNDLKNPPEAGPDNQI
EGESNETSKLANEDPYGEYEVSCLVDICYGDPNETGKHGLHFKVRWKGYGPDEDTWEPFE
GLSNCQERIQDFVRNGLRSKILPLPGHVDVICGGPPCQGISGYNRYRNVEDPLTDERNQQ
IVVFMDIVEFLKPKFVLMENVVDILRLDGASLGRYALSRLVHMKYQARLGTIAAGCYGLP
QFRLRVFIWGALPSERLPPFPLPTHDVVVRYWPPPEFERNTVAYDEGQPRKLEEAVFLQD
AISDLPAVTNHESREKMAYDKPPGTDFQRYIRLSKEEMMDSTPIQVTEAKEQMLYDHRPY
RLNEDNYLRVCQVPHRKGANFRDLPGVIVGDDNVVHRDTTKDTFVLPSGGPIVPDCVFTF
EKGKSKRPFARLWWDETVPTVLTFPHHRSQAILHPEQDRVLTVRECARLQGFPDFYRFCG
TIKERYCQIGNAVAIPVGKALGYTLGMAFQNLCGDEPLLTLPSNFSFLQALKDEIVVLRN
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggcgactggaaaacagccaaaggattgtaatcaattaacttccataatcagaagaaaa
tccccaaggcttctctcttcttctcgagcttcatcaactcctgaagccaagccaattttg
aataagaagaaaaagagcagagcagcatcggtgaattcagaaaagtcaatagttctttcc
atgcatttggagaatgaagaagcagaggccatccctttacaaatctacgaccctaatttg
gaagtaaagtgcttaagaagatcgccaaggtacactactaataagtacagaagtagttct
gaaagtaaacttcttgcattgccttcatctgcttcaacaactcctgaaattcagagaagg
aggtctccaagattcctttcagagggaaagagtgcaaatttgacagaaatgggaggtggg
ttttttggcgggtccaagaaaaggctgcgttttgaggaaaatcgaagtgcattgcatgga
tcggcaaatgggtcggggtcaaaaaaggttaaggtcgattttgagcgtttgaggaagtct
ccgaggtcgaataagagtttggatgaggatggaaatgggaatttgaacaggggatttctt
gctcttcctaagccaggttcatcagggaaaagtgatttgaggaaatgcaagttgagtggg
aagtccttgaggaaatccccaaggttgaatccggacatgtgtggcgaattgctggcattg
cctgagccaggttcgtcagttgaaaagcttgtttcgcatgagaagcggttgaggaatagg
atcataacaatgcatgttggaaaggagaaagaaaaagcacagaaaagtggttctgagaga
atggactctgcagagggaaatgaatcgagtaatgtgagtgaaaagttgttaaggtctaga
aaaattaggttcaaattgcctgaagcttcgcctaaaagtgagctaaaagctggtagtttt
gggggcagtgataaaaataatgtgagtcaaaagcggctaaggtctaggaaaatagagttc
aaattaacgcaaatttcgccaaatagtgattttgcagaaagctcttctgggggaagtgat
ttcggtgacatgggcaaaaagcggttgaggaataatgggatagaatttgaattgcctgaa
gctttagagaataacaattctatagatgacgatgtagatgtgagtgatgattctgagaaa
attgagactgaattggtggacgtaagtgctgtagaaaattgtgaggtagctgtcttgagt
gaaaagttcttgaggtctagaaaaattgcgtatcagatagttggaaatgaaaaagttcaa
gaaaagtcctctttaaagaaaaggggcattacaagaaataaagagccaccagtggaaaat
aagattcctcagaaaagagagagagagcggaagagtgttgctttctttgtgggggagcca
attccggaagaagaagctcgagagcgatggcgttggcgttatgatttgaagagccataga
tctaagaatgagggctggatcctaaatgctggtgaagaagacgaaacaatattgaatgta
gactttcattatgcacaggctaatgttgatggttgtgtgttaagtattggagattgcgca
tacataaagggtgaaggaaggaagaagcatattggtaggattctggaattttttagaact
acacaaggagaggattacttcagggttcaatggtatttcagagttgaagatacagttatc
aaagaagctgctacttttcatgacgagaagcggatattctactcgactatgatgaatgat
aatttgcttgattgcattctctccaaggttcacgtagcagaaataccactcgcagtaggc
cttgaaccagacactattccaccggctgacttttattatgatatggagtacagtgtggaa
tattcaacattccacaacctgcagacagataactcctacaagattgatgattcacattca
cttcaacctgttgaaggtttccatgctccaattactgcaacacatttggaggttttctct
ggttctgggcctctcaaatcagagttggccctattggacttatactctggttgtggcggg
atgtccactggattggggattggtgccaaggtctctagtatagatgttgtgacgagatgg
gcagttgatcttgaaaaatctgcatgcgacagcttgaagctaaatcatccagaaactcaa
gttagaaatgagtctgccgaagattttcttgagctgctgaaaagatggaaacaattatgt
gaatcttacattttcaatgacttaaagaacccccctgaagctggcccagataaccagata
gaaggggaaagcaatgaaacctcaaagttggctaatgaggacccttatggagaatatgaa
gtttcatgtctagttgacatttgttatggtgatcccaacgaaacaggaaagcacgggctc
cactttaaggttcgctggaaaggatatggtcctgatgaagatacatgggagccatttgaa
gggttaagcaattgtcaagaacggatacaggattttgtcagaaatggattaagatctaaa
atcttacctcttccaggtcatgttgatgtcatttgtgggggacctccttgccaaggcatt
agtggctataatcgctatcgcaatgtcgaggatcctttgaccgatgaaaggaatcagcag
attgtggtttttatggacatagtggaattcttgaagcccaagtttgtccttatggaaaat
gtggttgacattttgaggcttgatggagcttctctaggaagatatgcattaagtcgttta
gtgcatatgaaataccaagcaaggctaggaactattgctgctggttgttacggccttcca
caattccgcttacgcgtttttatatggggtgcacttccaagtgagagattacctccattt
ccacttcctacacatgatgtagttgtaagatattggcctccaccagaatttgagaggaac
actgttgcttatgacgaaggccaacctcgcaaacttgaggaagctgtttttcttcaggac
gcaatctctgaccttccagctgtcacaaaccatgaatctcgtgagaagatggcatatgac
aagcctccagggactgatttccaaagatacataagattgagtaaagaagagatgatggat
tccacgcctattcaagttacagaagcaaaagagcagatgctatatgatcacaggccctat
cgtttgaacgaggataactacctacgagtctgtcaagtccctcacagaaagggtgctaat
tttagagacctccctggggtgattgtgggagatgacaatgttgttcatcgagatacaacc
aaagatacttttgttctaccttctggggggccaattgttccagattgtgtctttaccttt
gagaaagggaagtctaaaaggccttttgcaagattatggtgggatgaaactgtgcctact
gtattaactttcccccaccaccggtcccaggctattctacatcctgagcaagaccgagta
ctcactgtacgcgagtgtgcaaggctacaagggttcccagacttttacaggttctgtggg
actattaaagaaagatattgtcaaattggaaatgctgtagctatacctgttggaaaagca
ttaggatatacacttgggatggcatttcaaaatctctgtggtgatgaaccactcttaacc
ctaccttccaatttctccttcctgcaagctttaaaggatgaaattgttgttttgagaaat
tga
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