Coffea arabica (coffee): 113706829
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Entry
113706829 CDS
T11342
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113706829
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
carb01007
]
113706829
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113706829
Enzymes [BR:
carb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
113706829
Amino acid related enzymes [BR:
carb01007
]
Aminoacyl-tRNA synthetase
Class I (G)
113706829
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113706829
Prokaryotic type
113706829
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
DALR_2
DUF6825
Motif
Other DBs
NCBI-GeneID:
113706829
NCBI-ProteinID:
XP_027084658
UniProt:
A0A6P6U240
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Position
8c:668210..676942
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AA seq
582 aa
AA seq
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MATTLLLKCYRPFLSPPHSPVSALLQKRVFVPTGACPNTRTVQSKIVRLRYFSSISTSNS
TNPQTRPGINSENGNIQPENNKQLWLYNTMSKQKELFKPKLAGKVGMYVCGVTAYDLSHI
GHARVYVFFDVLYRYLRYMGYEVKYVRNFTDVDDKIIARANQLGEDPINLSRRYCEEFHY
DMTHLQCLAPSTEPRVSDHLPQIIDMIKQILDKDFAYMIDGDVYFSVDKFPEYGRLSGRK
LEDNRAGERVAVDSRKKHPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGY
SFDIHGGGMDLVFPHHENEIAQSCAACDRSNVSYWMHNGFVTVDSEKMSKSLGNFFTIRQ
VLEVYHPLALRLFLIGTHYRSPINYSDVQLETASDRIFYIYQSLYDCENVLGEDDEATWK
NVNPPATASCINKFHDDFLTSMSDDLHTPVVLAAMSDPLKTINDLIHTRKGKKQELRLES
LAALEKALRNVLTVLGLMPTSYSEGLQQLREKALKRAKLTEDEVLQRIEERTTARKNKEY
EKSDAIRKGLAAVGIALMDSPEGTTWRPAIPLALQEKLVAAT
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggccaccactctcctcctcaagtgctatcgcccctttctctctccgccccattcccca
gtgtccgcccttcttcagaaaagggtcttcgtcccaacgggcgcttgtcccaacacaagg
acagttcagtccaaaatcgttaggcttcgttatttcagctcaatcagtactagtaatagt
actaatccacagacacggccaggcatcaatagtgagaatgggaatatacagccagagaat
aataagcagctgtggctgtacaatacgatgagtaagcagaaggagttgttcaagcccaaa
ttggctggaaaagtgggcatgtacgtttgtggtgtcaccgcttatgatcttagccacatt
ggccatgctcgcgtttacgtcttcttcgatgttctctatagatatctcaggtacatggga
tatgaagtcaagtatgtgcgcaattttactgatgttgatgacaagattattgcccgtgca
aatcagttgggggaggacccaataaatttaagcaggcgatattgtgaagagtttcattat
gacatgactcaccttcaatgtcttgctccttctacagaacctcgtgtctctgatcatcta
cctcaaattatagatatgatcaagcagatccttgataaggattttgcttatatgatcgac
ggtgatgtgtacttctctgtagacaaattcccggaatatggacggttatctggaagaaaa
ttggaagataatagagcaggtgagcgcgtagcagtggactcaaggaagaaacacccagct
gattttgctctgtggaaatctgcaaaggagggagagcctttttgggagagtccctggggt
cctggaaggcctggatggcacattgaatgcagtgccatgagtgctgcttatcttggttat
tcatttgacatacatggtggagggatggatcttgtgtttccgcaccatgagaatgaaatt
gctcaaagttgtgctgcatgtgacaggagcaacgtgagctattggatgcacaatggattt
gtcactgttgattcagaaaaaatgtcaaaatcacttggaaattttttcacaattcggcag
gttttagaagtttatcatcctctggctttgcgtcttttcttgattggaacacactaccga
tctccgatcaactactcagatgttcagcttgagactgcatctgaccgtatcttttacata
tatcagtcattatatgattgtgaaaatgttctgggtgaagatgatgaggcaacttggaaa
aatgttaatccaccagcaactgcaagttgcatcaataaatttcatgatgacttcttgact
tcgatgtcggatgatcttcacacccctgttgttctggctgcaatgtcggaccctctgaaa
acaatcaatgatcttattcatactcgcaagggaaagaaacaagaactaagactagagtcc
cttgcagctctggagaaggcattgaggaatgttttgactgttttaggactgatgccaact
agttactcagagggtttgcagcaactgagggaaaaggcactgaagcgggcaaagttgact
gaagatgaagttttgcagagaattgaagaaagaactacagccagaaaaaacaaagaatat
gaaaaatcagatgcaattaggaagggcttggctgctgtaggtattgctttgatggacagc
ccagagggcactacttggagaccagctataccactagcattacaagaaaagctggttgca
gcgacttga
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