Coffea arabica (coffee): 113706969
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Entry
113706969 CDS
T11342
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5-like isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113706969
Enzymes [BR:
carb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
113706969
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Other ribosome biogenesis factors
113706969
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
ASPP2-like_RA
FtsJ
Methyltransf_31
PCMT
RsmF-B_ferredox
Ubie_methyltran
RASSF8-10_RA
Methyltransf_4
Motif
Other DBs
NCBI-GeneID:
113706969
NCBI-ProteinID:
XP_027084884
UniProt:
A0A6P6U300
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All DBs
Position
8c:41369015..41374369
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AA seq
513 aa
AA seq
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MARKDRPAKKQTAASRKPNGGDKPLRGAERSAYFARREAAKVLRTVLEGDARRRAVGSIK
SLVYSPSIRNKRATFALVCETLKHLPVIKDVLRATNVLNSKWKRQEELLCVIAYDILFGK
ESSATGDAEKLLLSRKDKLRSALVHLLEKKRVKHIKELMPQCKISDMPKPRYVRVNTLKM
DVESAILELTKQYAVDKDDMVPGLLKLPPSTDLHKHPLVLNGSIFMQGRASSMVAAALEP
KPGWWVSLLSTEELIPSDVLDACSAPGNKTVHLAAIMKGKGKIIACELDKQRVKRLEATV
RLAGATNVKVKHEDFLKLNPEEPHCSKIRAILLDPSCSGSGTAIDRLDHLLPSYAAVLDD
TGNSDRLMKLAAFQKKALEHAFSFPAAERIVYSTCSIHQIENEDVVKSVLPLAASHGFQL
APVHPQWPRRGLPVLDGSQHLLRTDLVEDGEGFFIALFVRKADKRPEGYAERETCERYRS
KRFLRKKMDFVNYFFNNRFRMLLYPQFRFKKQR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggaaggatcggccggcgaagaaacaaacagctgcatctaggaagccgaacgga
ggagataaaccgttgagaggagccgagaggtcggcttacttcgccaggagggaggcggct
aaggtcttgcgcaccgtgcttgaaggggacgcccgccggcgagctgtggggtccattaag
tcactggtttatagcccttccatcaggaacaaaagagccacctttgctttggtttgtgaa
accctcaagcatctcccagttatcaaagatgttttgcgagccactaatgtattgaatagc
aagtggaagagacaagaagagttactatgtgtaattgcatatgatatcctctttggtaag
gagtcttcagcaactggggatgcagaaaagcttctcttgtccaggaaagataaattacgg
tcagctttggttcatcttttagagaaaaagagagtgaagcacataaaagaattgatgcct
caatgcaaaatatctgatatgccaaaaccacgttatgttcgtgtaaatactctgaaaatg
gatgtggagtctgctatacttgagttgactaaacagtatgcggttgacaaggatgacatg
gtacctggtttgctaaagctaccaccaagtactgatttgcataaacatccattggtatta
aatggaagtatttttatgcagggcagagcaagttccatggttgcagcagcactcgagcct
aaaccaggatggtgggtgagtttactcagcactgaagagttaattccttcagatgttctt
gatgcatgctctgcacctggaaacaaaactgttcatctagctgctattatgaagggaaag
gggaaaataatagcttgtgaacttgataagcagagagtaaaacgattagaagctaccgtc
agacttgctggtgctaccaatgtcaaagttaaacatgaagacttcttgaaattgaatcct
gaagagcctcattgctcaaagattcgagccatacttttagatccatcatgttcaggatct
ggtactgccattgacaggctagatcatctgcttccatcatatgctgcagtattagatgat
actggcaacagtgataggctgatgaagcttgctgcttttcagaagaaggctttggaacat
gcattttcatttccagcagccgagagaattgtttacagcacatgttccatccaccagatt
gaaaatgaagacgttgtcaaatctgttttaccccttgcagcatctcatggttttcaactt
gcaccagttcatccccagtggcctcggcgtggcctcccagttcttgatggatctcaacat
ttgctgcggaccgacttggtggaagacggagaggggttcttcattgcactgtttgtacga
aaagcagataaaagacctgaaggatatgcagaaagggaaacttgcgaaagatacaggagc
aagagatttttgaggaagaagatggactttgtaaattatttctttaacaacaggttcaga
atgttgttatatcctcaatttcgcttcaagaaacagagataa
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