Coffea arabica (coffee): 113707237
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Entry
113707237 CDS
T11342
Name
(RefSeq) tryptophan--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113707237
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
carb01007
]
113707237
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113707237
Enzymes [BR:
carb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
113707237
Amino acid related enzymes [BR:
carb01007
]
Aminoacyl-tRNA synthetase
Class I (G)
113707237
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113707237
Prokaryotic type
113707237
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
BTB-POZ_ANK-like
Motif
Other DBs
NCBI-GeneID:
113707237
NCBI-ProteinID:
XP_027085265
UniProt:
A0A6P6U3R3
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Position
8c:40239702..40248570
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AA seq
411 aa
AA seq
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MGRAPALLSQFLSLSTTAGPHFRASMTCRLNPRKYLNGTAKIPPIRENLRCLCSVAVSEP
ATSEPSSTPVKKRIVSGVQPTGSIHLGNYLGAIKNWIDLQNAYDTLFFIVDLHAITLPYD
TQQLSKATKETAAIYLACGVDPSKASVFVQSHVRAHVELMWLLSSTTPIGWLNRMIQFKE
KSLKAGDENVGVALLTYPVLMASDILLYQSDYVPVGDDQKQHLELTRELAQRVNYLYGGR
KWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVVNNK
IKRCKTDSFPGLEFDNSERPECNNLLSIYQLVTGKTKQEVAEECRDMNWGTFKPVLTDAL
IAHLHPIQVRYGEIMSDASYLDSVLAEGARKAADIADNTLKNVYQAMGFLR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggcacccgcacttctctcgcaattcctctctttgtcaacgacggctgggcct
cacttcagagcttccatgacatgtagattgaatccgaggaaatacttgaacggaaccgcc
aaaattccgccgattcgcgaaaatttgcgatgtctctgcagcgtagccgtctcggagcct
gcgacttcagaaccgtcttccactcccgtaaagaagaggatagtctctggtgtgcagccc
acaggatccatacatcttggcaattatcttggggctataaaaaattggattgacttgcaa
aacgcatatgacacccttttcttcattgtggacctgcatgcgatcaccttgccttatgat
acacaacagctatccaaagcaacaaaagaaacagcagcaatttacttggcatgtggagtg
gatccctccaaggcttcagtgtttgtgcagtctcatgtccgtgctcatgtagaattgatg
tggctgctcagttctacaaccccaattggttggctgaatagaatgatccaattcaaggag
aaatcattgaaagcgggagatgaaaatgttggggttgctctgctgacatatcctgtccta
atggcgtctgatattttgctataccagtctgattatgtccctgttggggatgatcagaaa
caacatctggagttaactcgagaacttgctcagcgtgttaactatctttatggaggaagg
aagtggaagaaattgggagggcgaggtggtgcaatttttaaggttccggaaccccttatt
ccacctgctggagctcgagtcatgtccctaactgatggtctttcaaagatgtccaaatcg
gcgccttctgatcagtctcgaatcaatttgcttgaccctaaagatgttgtcaataataaa
attaagcgttgcaagactgactcatttcctggcctggaatttgataactctgaaagacct
gaatgtaacaatcttctctcaatttatcagctcgtcacggggaagacaaagcaggaagtg
gctgaagaatgtcgagatatgaactgggggacgttcaaacccgtccttacagatgctttg
atcgctcacttgcatcccatccaggttcgatatggggaaatcatgtctgatgcaagttac
ctagattcagtgttggctgaaggtgctagaaaagctgcagacattgcagataataccctc
aaaaatgtgtaccaagctatgggattcttgcggtga
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