Coffea arabica (coffee): 113707299
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Entry
113707299 CDS
T11342
Name
(RefSeq) protein indeterminate-domain 7-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113707299
Transcription factors [BR:
carb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113707299
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
113707299
NCBI-ProteinID:
XP_027085366
UniProt:
A0A6P6U5C8
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Position
8c:complement(41039570..41042984)
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AA seq
581 aa
AA seq
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MMKAAGMVVEDSMSNLTSGSNDASISSGNRLEIGAVYPQQQQLPPLASSPTNQSAQPASK
KKRNLPGNPDPEAEVIALSPRTLLATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQR
SNKEVIRKKVYICPETTCVHHDPSRALGDLTGVKKHFSRKHGEKKWKCEKCSKRYAVQSD
WKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAITTNNHPLGLLGGGGN
STTSSVQLHLQNHPLHGGGLPVFPLKREQDQLQLQLQRQQSFNSNLRPPELPPWLSDPGG
GPPTSHDLFSNPRLDQTMIHHHENVNNPNPNPTLSSSFQAAAASASPHMSATALLQKAAQ
MGVTISKPASSQSAAGADEVAAAASATTTMLRPHQAAHVSTGLMGSTSIILATSTAGSSL
GLASREDQMGIGSSSGSGLMHHHGLMASFGNKTSAITSAGCMEHPHQAQISVGPLTTHDH
LGGGALMGMVNSHHHDGFGENFQEVLLTSRRGNNGRSNSGKEGGVFGGRGNNINDGLTRD
FLGLKAFPTARETFLSLDDLHQLGGSSFNDQQGHHNPAAPW
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggctgcaggtatggtggtagaagacagcatgtcaaatttgacatctggatct
aatgatgctagcatttcttctggcaacagactagaaattggtgctgtgtacccacagcag
cagcagctgcctcctttagcatcatcaccgactaatcaaagtgctcaaccagcttcaaag
aaaaagagaaatcttccaggcaatccagaccctgaggcagaagtgatagctttgtctcca
agaacccttctggcaacaaacaggtttatatgtgagatctgtaacaaagggttccaaagg
gatcaaaacctccaattgcacaggaggggacataatttaccctggaagttaaagcaaaga
agcaacaaagaagtaataaggaagaaggtgtatatttgcccggaaactacatgcgtgcac
catgatccctcacgggcacttggggacctcactggagtcaagaaacacttttccagaaag
catggtgagaagaaatggaagtgtgaaaagtgctcaaagcgttacgctgttcaatcagat
tggaaagctcattccaagatttgtggtactagagaatatagatgtgactgtggaaccctt
ttctcaaggagggacagtttcatcacccatagagctttctgcgacgccttggcagaagag
agtgcccgggcaattacaacaaacaaccacccactaggactactaggcggcggcggcaat
agtactacatcttcagtccaactccacctccaaaaccatcctctccatggcggcggcctc
cccgtgtttcctctcaagcgagaacaagatcagttacagttacagttacaacgacaacaa
agcttcaatagcaacttgaggccaccagagctgccgccttggctctctgatccaggggga
ggtccaccaacaagtcatgacttgttcagcaacccgagactggaccaaaccatgattcat
catcatgaaaatgtcaacaaccctaaccctaatccaactctttcctcctcattccaagcc
gccgcggcatcggcatcaccccacatgtctgcaactgcattgctgcaaaaagcagcacaa
atgggagttacaatcagcaaacctgcatcaagtcaatcagctgctggtgcggacgaggtg
gcggccgctgcctcggcgacaacaacgatgctgagaccccaccaagcagctcacgtgagt
actggtttgatgggttcgacatcaataatattggccacttctacagctggttctagcctg
ggtctggcctcacgtgaagatcagatgggaatagggtctagttctggatctgggcttatg
catcatcacgggctgatggcatcttttgggaacaaaactagtgctatcacctctgcaggt
tgcatggaacatccacaccaagcacaaataagtgttggtccattaacaactcatgatcat
ctaggaggaggagctttgatgggtatggtaaattctcatcatcacgatggattcggggag
aactttcaggaagtgttattgacttcaagaagggggaataatggaagaagtaatagcggt
aaagaaggtggcgtatttggtggccgtggcaacaatattaatgacggattaacaagggat
ttcttgggtctaaaagccttccctactgctagagaaacatttcttagtctggatgatctt
catcaacttggtggctcatctttcaatgaccagcagggtcatcacaatccagcagcacca
tggtag
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