Coffea arabica (coffee): 113707413
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Entry
113707413 CDS
T11342
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
carb Coffea arabica (coffee)
Pathway
carb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
113707413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
carb04040
]
113707413
Ion channels [BR:
carb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113707413
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
113707413
NCBI-ProteinID:
XP_027085524
UniProt:
A0A6P6U4Y6
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Position
8c:26580305..26585445
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AA seq
733 aa
AA seq
DB search
MKFKKEKQVRFYNDGKQDFELFWEKKIAQQPLDKQLPTYKGASSVPFMKGEGGFGDRSRV
NVFPRFGRSKVFPDGNYEPGKKWVLDPGSELSLQWNRIFLFSCFVALFVDPLFFYLPAVV
NDEESSSSCMTTDMNLGITITCFRTLADVFYVLHVFIKFRTAYVSPSSRVFGKGELVMDL
SLISQRYLKSDFFIDVIAALPLPQIVIWFIIPAIRSSHADHTNNALVLIVLLQYIPRLYL
IFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAFWYLLSIERDATCWKSACRQE
FKSTNCSLHFLDCRTVDHDERRTWANSTAVFSNCNPDNTTFFNFGIFGNAVTNNVLSVNF
IEKYFYCLWWGLQNLSSYGQTLSTSTFIGETAFAILIAILGLVLFAHLIGNMQTYLQSLT
VRLEEWRLKRRDTEEWMRHRQLPPDLQERVRRFVQYKWLTTRGVDEESILHALPTDLRRD
IQCHLCLDLVRRVPFFSEMDDLLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGTL
ESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSALNLPSSTRTVKSLSEVEAFALR
AEDLKFVANQFRRLHSKKLQHTFRYYSHHWRTWAACFIQAAWRRHKKRMLAKCLSMTESF
SLASDEQFVDSNEKTEEATAAKSSNSHINLGVTILASRFAANTRRGAQKLKDVELPKLQK
PEEPDFSAEADDE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaagaaagagaaacaagtgaggttttacaatgacgggaaacaagattttgaa
cttttttgggagaagaaaattgctcaacagccccttgataaacaactgccaacatacaag
ggtgcttcttcagtacctttcatgaaaggtgaaggaggatttggtgacaggagtagagta
aatgtatttcccagatttggaaggtctaaagtttttccagacggaaattatgagccagga
aagaaatgggttctggatcctggaagtgaactttccctgcagtggaacagaatttttctt
ttttcttgctttgtagcactttttgttgatccattgtttttttaccttcctgctgtggtg
aatgatgaggaatcctcatcctcgtgtatgacaacagacatgaatcttgggatcactatc
acctgttttaggactctggctgatgtattttatgtcttacatgtatttataaaatttaga
actgcttatgtctccccaagctcaagggtatttggcaaaggtgaactagtcatggatctg
agtttgatttctcagaggtacttgaagtcagatttcttcatagatgtaattgcagcactg
cctcttcctcagatagtcatatggttcattataccagccattagaagctcccatgctgat
cataccaacaatgctcttgtactgatagttcttctccagtatatccccagattatatctg
atattcccattgagttctcagattattaaagcaactggagttgtcacaaaaacggcatgg
gctggggctgcatataatctgcttctctatatgttagcaagccatgtcttgggggctttc
tggtacttattatctattgaacgggatgctacttgttggaaatctgcctgcaggcaggag
ttcaagtccactaattgttcacttcattttttggattgtcgaactgtagatcatgatgag
aggaggacatgggcaaactccactgctgtttttagtaactgcaatcctgacaataccaca
tttttcaactttgggatatttggaaatgccgttactaacaatgtcctctctgtaaacttc
attgaaaaatacttctactgtttgtggtggggtttacaaaatctaagttcttatggccag
acgttatccacaagcacatttattggggagactgcttttgccatacttattgctatattg
ggccttgttctgtttgcacacttgatcggaaacatgcagacctacctgcaatctctcact
gtgaggcttgaggagtggaggctgaagagacgggataccgaggagtggatgaggcatcgc
cagctccctccagatctacaggagcgtgttaggcgatttgtgcagtacaagtggctaaca
acaaggggagttgatgaagaatctatattgcatgctttacctacagatttacgtcgagac
atccaatgccacctttgcttagaccttgttcgacgagtccctttcttttcagagatggat
gatttgcttcttgatgccatttgcgagcgcctagtatcgtccctaagtacccaaggtacc
tacattgtacgtgaaggtgatcccgttacagagatgctctttatcatcagaggcacattg
gagagctcaacgacaaatggaggccgtacaggtttctttaactcaattactctgaggccg
ggagacttctgtggtgaagaactgctagcttgggctttgcttccaaaatctgcactcaat
ttgccttcttcaacaagaacagtgaaatccctcagtgaagtagaagcctttgcattacga
gctgaagatctcaagtttgtagctaatcagttcagacggcttcacagtaagaagctacaa
catacatttcggtattactctcaccattggaggacatgggctgcctgtttcattcaggct
gcttggcgcaggcataagaagcgaatgttggcaaaatgtctaagtatgactgagtcattt
tctttggcttcagatgagcaatttgttgatagtaatgaaaaaactgaggaagccactgca
gctaaatcatcaaattcccacattaatctaggagtcacaatacttgcctcaaggtttgca
gcaaatacaaggagaggagcccaaaagttgaaggatgttgaattgccaaaactgcagaaa
cctgaagagccagatttttctgctgaagcagatgatgaatag
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