KEGG   Coffea arabica (coffee): 113707488
Entry
113707488         CDS       T11342                                 
Name
(RefSeq) aberrant root formation protein 4 isoform X1
  KO
K23345  glomulin
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:carb04121]
    113707488
Ubiquitin system [BR:carb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    113707488
SSDB
Motif
Pfam: Kinetochor_Ybp2 YfiO
Other DBs
NCBI-GeneID: 113707488
NCBI-ProteinID: XP_027085645
UniProt: A0A6P6U4P2
LinkDB
Position
8c
AA seq 657 aa
MDPETTDLPTPCTSSAAVVDRLRRSLSSCSQLIQTGVDFHKSEQSLSDLVLFLNSISDSF
VREPENQDLENASFQILTEIRLFITSSSVDQQAVIDALSFELPKTAARFACVSPRCMEVA
QSIVDCFTDKCSPRDMLSILCEAIGSPRDAFTVPSYFAPLLSGFPKVFVSIRRRQFEQVK
AAVPVILNALKAIVLDSDDKDADLGDIFHKANCIADSMKAVCLELEGKDNEKLCALLGLF
VLQITALASMGIEYRLAHSSPLVLKLSHFLQSCGLSYLGLIMGTDVEKLLGIAVGDGGDD
LVGCFSDIWLGASILVIWGYKSNEVALAAGADLVALKDELQSSRIKRWHAVGMLKHVLLC
LYLPLELKKDAINFLLSIMYPKLSQMPNDENEDYSTYMPTLCSALQAIQVVIMYATDVIL
RKNAFAAFKELLADCPTSLRFDILRALIKDGDSSSMIAVLLDCVREEVRLESSKSPPASK
VSKAESEGSQGTIFWSSSALELVELVLRPPGGGPPSLPEHSDAVLQNRPNQSTNIHWLIM
LPSNSVHKVHDQKYFYATCQKSDQIHFSCFSFMQVLSALNLYRFILIKESTGKSNNSGVL
SRDSLVKAHSEWLLPLRTLVTRMMAEAQCDSDELALCGLNPVEVVLYRCIELVEQLL
NT seq 1974 nt   +upstreamnt  +downstreamnt
atggatccagaaacaaccgaccttcctactccatgtacatcttccgcagcggtcgttgat
cgtcttcgccggtccctctcctcatgctcccagttgattcaaaccggcgttgatttccac
aagtccgagcaatctttgtcggacctcgttcttttcctcaactccatctccgactctttt
gtcagggaaccagaaaaccaagacttggagaatgcctcttttcaaattctcactgaaatt
cgtctcttcattacctcttcttcagtggaccagcaggctgttattgacgctctatcattt
gagttgccaaagaccgctgctaggttcgcctgtgtatctccaagatgtatggaggttgct
caatccattgtggattgttttactgacaagtgtagtcctcgcgatatgctttccattctc
tgtgaggcaataggttctcctagggatgcgttcacggtgccaagttatttcgctcctcta
ctaagtggctttccaaaagtttttgtttcaataaggaggaggcaatttgagcaagtaaaa
gctgcagttcccgttattcttaatgctttgaaggcaatagtactagattcagatgataag
gatgcagatcttggcgatattttccacaaagcaaattgcattgctgattctatgaaagca
gtttgtctagagttggaaggcaaggacaatgagaaactctgtgcgttattgggcctattt
gtcttgcagatcacggcccttgcttcaatgggcattgaatataggcttgcacactcttct
cctttggtgctaaagctgtcacacttccttcagtcttgtggtttatcatatcttggtttg
ataatggggacagatgttgaaaaacttttgggcattgctgtgggagatggtggagatgat
ttggtgggttgtttctctgacatctggcttggcgcgtcaattttagtaatttggggttac
aagtcaaatgaggttgctttggctgctggggcagatttggtggcactcaaggacgaactt
caaagtagccggattaaaagatggcatgcagtgggcatgttaaagcatgtactattgtgc
ttatatctgccattggagttgaagaaggatgccattaacttcctgctaagcattatgtat
ccaaagttatcccagatgcctaatgatgaaaatgaagactactcaacttatatgccaact
ctttgttctgctttgcaggctattcaagtggtaattatgtatgcaacagatgtaatccta
cggaagaatgcttttgcagcattcaaagagttacttgcagattgtccaacttccctaaga
tttgacattttaagggcattaataaaagatggcgactcttcttccatgattgcagtgctt
ctggactgtgttagggaggaagtgcgcctagaaagtagcaaaagtccgcctgcaagcaaa
gtctcaaaagcagaaagcgaaggctctcaaggcactattttttggagttcgagtgccctt
gaattggtggagctggttttgaggcctccagggggagggcctccatcgcttccagagcac
agtgatgcagtactgcagaacagacccaaccaatcaaccaacatacattggttgattatg
ctgccttcaaactcagttcacaaagtccatgatcaaaagtacttctatgccacttgtcaa
aaatctgaccagatacatttttcttgcttctctttcatgcaggttctttctgctctcaat
ctctacagattcattttgatcaaggaatcgactggaaaaagcaacaattccggggtgctt
tccagggacagcctggtgaaggctcacagtgaatggcttctgcctctccggactttagtg
acaagaatgatggctgaagctcaatgtgacagtgacgaactagcactgtgtggcttgaat
ccggtcgaggttgtcttgtatcgttgtatcgaacttgttgaacaacttctgtag

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