Coffea arabica (coffee): 113707705
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Entry
113707705 CDS
T11342
Name
(RefSeq) nuclear transcription factor Y subunit B-6
KO
K08065
nuclear transcription Y subunit beta
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113707705
Transcription factors [BR:
carb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
113707705
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
Bromo_TP
CENP-T_C
TAF
Motif
Other DBs
NCBI-GeneID:
113707705
NCBI-ProteinID:
XP_027085797
UniProt:
A0A6P6U746
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Position
9c:42988144..42992041
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AA seq
267 aa
AA seq
DB search
MELGGNGGFTGYRRFPQPNSGMMRAAEISMGLPSKTNHTTPPSSSSSSPAAAADHMMMDG
ECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQRE
QRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRFREFDGGERGGSLRAAHHDLAVGKRANI
DHLAAAAGLGLGGGGFATYPPPHFHLPHHPPFVAAGFFTTAAVPIHMNGFLKDPSSTGGG
QATSSQAAAVAASDGGHQEQAFDNCEE
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggaacttggaggaaatggaggcttcactgggtaccgcaggttcccccaaccaaactcc
gggatgatgagagcagcagagataagcatgggactgccatctaaaacaaaccatactact
ccgccatcgtcctcgtcctcgtcccctgccgccgctgctgatcatatgatgatggacggt
gaatgcacggtccgggagcaagacaggttcatgccaattgctaacgtgatcagaatcatg
cgaaagatccttcccccacatgctaagatctccgatgatgccaaggaaactatccaggaa
tgcgtatcggagtacattagcttcatcaccggagaagccaatgagcgttgccagcgcgag
cagcgaaagactatcactgctgaggacgtgctttgggccatgagtaagcttggcttcgat
gactacattgagcctctaaccctatatctccaccgctttcgcgagttcgacggcggtgag
cgtggtggctctctaagggccgctcatcatgatcttgcagtggggaagagggcaaatatt
gatcatctagctgcagctgctggcttaggattaggaggcggaggctttgcaacctatccc
ccacctcattttcacttgcctcatcaccctcctttcgtcgctgctggcttcttcaccacc
gctgctgttccaattcacatgaacgggtttctcaaagatccatcctcaactggagggggc
caagcaacttcttcccaggctgctgctgtggcggctagtgatggtggtcatcaagaacaa
gcatttgacaactgcgaggagtaa
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